RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 STXBP5LQ9Y2K9 1186 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 SF3B1O75533 1304 aaKnown RBP eCLIP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 DNAH12Q6ZR08 3092 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 O00370 1275 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 ZSCAN12O43309 604 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 ZNF500O60304 480 aaPredicted RBP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 GJB5O95377 273 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 GALTP07902 379 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 SETSIPP0DME0 302 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 ACRP10323 421 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 UNGP13051 313 aaPredicted RBP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 CD58P19256 250 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 GDF10P55107 478 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 CDH8P55286 799 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 NOMO3P69849 1222 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 RNASELQ05823 741 aaKnown RBP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 LCLAT1Q6UWP7 414 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 VASH1Q7L8A9 365 aaPredicted RBP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 FAM193BQ96PV7 902 aaPredicted RBP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 RTP3Q9BQQ7 232 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 ISCUQ9H1K1 167 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 DEF6Q9H4E7 631 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 LUC7LQ9NQ29 371 aaKnown RBP8.27□□□□□ -1.09
PCNX4-210ENST00000555740 ADAM28Q9UKQ2 775 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 CDH9Q9ULB4 789 aa8.27□□□□□ -1.09
PCNX4-210ENST00000555740 A0A0A6YYK5 440 aaPredicted RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 NRP1O14786 923 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 TRAPPC3O43617 180 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 AKR1B10O60218 316 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 B3GAT3O94766 335 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 OAZ2O95190 189 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 ITGB1P05556 798 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 ARHGAP25P42331 645 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 BCAR1P56945 870 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 ARID5AQ03989 594 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 MRPL58Q14197 206 aaKnown RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 CNGA2Q16280 664 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 DSTYKQ6XUX3 929 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 PHF13Q86YI8 300 aaPredicted RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 REXO1L1PQ8IX06 675 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 SLC39A11Q8N1S5 342 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 ACRBPQ8NEB7 543 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 TFAP2BQ92481 460 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 ZNF592Q92610 1267 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 TNIP3Q96KP6 325 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 PPP1R13BQ96KQ4 1090 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 PCDHB18PQ96TA0 734 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 TSGA10Q9BZW7 698 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 SNX25Q9H3E2 840 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 CACNG4Q9UBN1 327 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 MRPL42Q9Y6G3 142 aaKnown RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 BRCA2P51587 3418 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 TBC1D4O60343 1298 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 IPO7O95373 1038 aaKnown RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 MMEP08473 750 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 TMEM253P0C7T8 217 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 IGFBP6P24592 240 aaPredicted RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 PCSK1P29120 753 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 USP8P40818 1118 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 MAPK8P45983 427 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 RPL34P49207 117 aaKnown RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 HADHBP55084 474 aaKnown RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 GFPT1Q06210 699 aaPredicted RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 SPA17Q15506 151 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 SGO2Q562F6 1265 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 WSCD1Q658N2 575 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 PALB2Q86YC2 1186 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 HERC6Q8IVU3 1022 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 COLGALT1Q8NBJ5 622 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 BCL7CQ8WUZ0 217 aaPredicted RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 ZNF606Q8WXB4 792 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 TRIM11Q96F44 468 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 MMS19Q96T76 1030 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 ACBD6Q9BR61 282 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 DESI2Q9BSY9 194 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 AVENQ9NQS1 362 aaPredicted RBP8.26□□□□□ -1.09
PCNX4-210ENST00000555740 PCDHA13Q9Y5I0 950 aa8.26□□□□□ -1.09
PCNX4-210ENST00000555740 MYO16Q9Y6X6 1858 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 THAP12O43422 761 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 RTN2O75298 545 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 MTA2O94776 668 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 MYBL1P10243 752 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 TNFAIP3P21580 790 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 BRD2P25440 801 aaKnown RBP8.25□□□□□ -1.09
PCNX4-210ENST00000555740 PPM1AP35813 382 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 GNL1P36915 607 aaPredicted RBP8.25□□□□□ -1.09
PCNX4-210ENST00000555740 BRCC3P46736 316 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 OR1G1P47890 313 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 FUT10Q6P4F1 479 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 ALKBH5Q6P6C2 394 aaKnown RBP8.25□□□□□ -1.09
PCNX4-210ENST00000555740 FAM171BQ6P995 826 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 MON1BQ7L1V2 547 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 METTL23Q86XA0 190 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 B3GALNT2Q8NCR0 500 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 VCPIP1Q96JH7 1222 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 ZNF558Q96NG5 402 aa8.25□□□□□ -1.09
PCNX4-210ENST00000555740 HNRNPABQ99729 332 aaKnown RBP8.25□□□□□ -1.09
PCNX4-210ENST00000555740 LBHD1Q9BQE6 289 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms