RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZNF280AP59817 542 aaPredicted RBP4.1□□□□□ -1.75
SRP54-207ENST00000555535 GNAI1P63096 354 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 ZNF91Q05481 1191 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 HABP2Q14520 560 aaPredicted RBP4.1□□□□□ -1.75
SRP54-207ENST00000555535 TAF7LQ5H9L4 462 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 CT47A1Q5JQC4 288 aaPredicted RBP4.1□□□□□ -1.75
SRP54-207ENST00000555535 CAPRIN2Q6IMN6 1127 aaKnown RBP4.1□□□□□ -1.75
SRP54-207ENST00000555535 GADL1Q6ZQY3 521 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 ZNF398Q8TD17 642 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 ADAMTS18Q8TE60 1221 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 ZFYVE19Q96K21 471 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 EFHD1Q9BUP0 239 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 BRD9Q9H8M2 597 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 MAN1C1Q9NR34 630 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 GNL3LQ9NVN8 582 aaKnown RBP4.1□□□□□ -1.75
SRP54-207ENST00000555535 SIDT1Q9NXL6 827 aaKnown RBP4.1□□□□□ -1.75
SRP54-207ENST00000555535 CALCOCO1Q9P1Z2 691 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 CFAP97Q9P2B7 532 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 CYP2C19P33261 490 aa4.09□□□□□ -1.75
SRP54-207ENST00000555535 CLCN2P51788 898 aa4.09□□□□□ -1.75
SRP54-207ENST00000555535 TPTEP56180 551 aa4.09□□□□□ -1.75
SRP54-207ENST00000555535 TCF15Q12870 199 aa4.09□□□□□ -1.75
SRP54-207ENST00000555535 Q6ZWC4 215 aa4.09□□□□□ -1.75
SRP54-207ENST00000555535 SPATS2Q86XZ4 545 aaKnown RBP4.09□□□□□ -1.75
SRP54-207ENST00000555535 PELI3Q8N2H9 469 aa4.09□□□□□ -1.75
SRP54-207ENST00000555535 DMRTA2Q96SC8 542 aa4.09□□□□□ -1.75
SRP54-207ENST00000555535 THAP7Q9BT49 309 aaPredicted RBP4.09□□□□□ -1.75
SRP54-207ENST00000555535 CCNL1Q9UK58 526 aaPredicted RBP4.09□□□□□ -1.75
SRP54-207ENST00000555535 TRIM75PA6NK02 468 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 NTN3O00634 580 aaPredicted RBP4.08□□□□□ -1.76
SRP54-207ENST00000555535 VIL1P09327 827 aaKnown RBP4.08□□□□□ -1.76
SRP54-207ENST00000555535 TNFRSF1BP20333 461 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 EDNRBP24530 442 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 HSD3B2P26439 372 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 CDC25AP30304 524 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 GCLCP48506 637 aaPredicted RBP4.08□□□□□ -1.76
SRP54-207ENST00000555535 KLF1Q13351 362 aaPredicted RBP4.08□□□□□ -1.76
SRP54-207ENST00000555535 FAM187BQ17R55 369 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 INAVAQ3KP66 663 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 GIMAP6Q6P9H5 292 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 CUZD1Q86UP6 607 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 PHLDB1Q86UU1 1377 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 OSR1Q8TAX0 266 aaPredicted RBP4.08□□□□□ -1.76
SRP54-207ENST00000555535 JADE3Q92613 823 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 SLKQ9H2G2 1235 aaPredicted RBP4.08□□□□□ -1.76
SRP54-207ENST00000555535 GLOD4Q9HC38 313 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 GPR35Q9HC97 309 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 LIMCH1Q9UPQ0 1083 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 IPPQ9Y573 584 aa4.08□□□□□ -1.76
SRP54-207ENST00000555535 WASHC2AQ641Q2 1341 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 ACOT8O14734 319 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 NDUFS2O75306 463 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 FESP07332 822 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 C5AR1P21730 350 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 RENBPP51606 427 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 IL10RAQ13651 578 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 RNF219Q5W0B1 726 aaPredicted RBP4.07□□□□□ -1.76
SRP54-207ENST00000555535 KRT26Q7Z3Y9 468 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 TMPRSS12Q86WS5 348 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.07□□□□□ -1.76
SRP54-207ENST00000555535 CBARPQ8N350 705 aaPredicted RBP4.07□□□□□ -1.76
SRP54-207ENST00000555535 ZNF548Q8NEK5 533 aaPredicted RBP4.07□□□□□ -1.76
SRP54-207ENST00000555535 HDAC10Q969S8 669 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 MRGPRX4Q96LA9 322 aa4.07□□□□□ -1.76
SRP54-207ENST00000555535 ZNF785A8K8V0 405 aa4.06□□□□□ -1.76
SRP54-207ENST00000555535 RPLP2P05387 115 aaKnown RBP4.06□□□□□ -1.76
SRP54-207ENST00000555535 GJB1P08034 283 aa4.06□□□□□ -1.76
SRP54-207ENST00000555535 RPS13P62277 151 aaKnown RBP4.06□□□□□ -1.76
SRP54-207ENST00000555535 TLE1Q04724 770 aa4.06□□□□□ -1.76
SRP54-207ENST00000555535 CLUL1Q15846 466 aa4.06□□□□□ -1.76
SRP54-207ENST00000555535 C3orf36Q3SXR2 165 aa4.06□□□□□ -1.76
SRP54-207ENST00000555535 CCDC93Q567U6 631 aa4.06□□□□□ -1.76
SRP54-207ENST00000555535 SDE2Q6IQ49 451 aa4.06□□□□□ -1.76
SRP54-207ENST00000555535 NPM2Q86SE8 214 aaKnown RBP4.06□□□□□ -1.76
SRP54-207ENST00000555535 AMOTL1Q8IY63 956 aa4.06□□□□□ -1.76
SRP54-207ENST00000555535 DDX17Q92841 729 aaKnown RBP4.06□□□□□ -1.76
SRP54-207ENST00000555535 CAMK1GQ96NX5 476 aa4.06□□□□□ -1.76
SRP54-207ENST00000555535 CIPCQ9C0C6 399 aa4.06□□□□□ -1.76
SRP54-207ENST00000555535 MRPS18AQ9NVS2 196 aaKnown RBP4.06□□□□□ -1.76
SRP54-207ENST00000555535 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.06□□□□□ -1.76
SRP54-207ENST00000555535 TCRBV5S1A1TA0A578 114 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 IFITM10A6NMD0 228 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 HTRA2O43464 458 aaPredicted RBP4.05□□□□□ -1.76
SRP54-207ENST00000555535 PCDHGA12O60330 932 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 PRKCBP05771 671 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 NGFRP08138 427 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 CPEP16870 476 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 CNGA1P29973 690 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 PPIFP30405 207 aaKnown RBP4.05□□□□□ -1.76
SRP54-207ENST00000555535 IARSP41252 1262 aaKnown RBP4.05□□□□□ -1.76
SRP54-207ENST00000555535 ZNF135P52742 658 aaPredicted RBP4.05□□□□□ -1.76
SRP54-207ENST00000555535 PSMC1P62191 440 aaKnown RBP4.05□□□□□ -1.76
SRP54-207ENST00000555535 TMEM63BQ5T3F8 832 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 PPP4R3AQ6IN85 833 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 PGM2L1Q6PCE3 622 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 TMEM108Q6UXF1 575 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 MMP21Q8N119 569 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 CNTD1Q8N815 330 aa4.05□□□□□ -1.76
SRP54-207ENST00000555535 B4GALNT2Q8NHY0 566 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms