RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 PROSCO94903 275 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 DNAJB2P25686 324 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 GCNT1Q02742 428 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 RCN2Q14257 317 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 FBXO47Q5MNV8 452 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 MTHFD1LQ6UB35 978 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 TRIM72Q6ZMU5 477 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 RAPH1Q70E73 1250 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 C1orf127Q8N9H9 656 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 NPLOC4Q8TAT6 608 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 MICAL1Q8TDZ2 1067 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 CELF6Q96J87 481 aaKnown RBP12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 GLT1D1Q96MS3 346 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 RUNDC3BQ96NL0 473 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 MAFBQ9Y5Q3 323 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 SLC26A4O43511 780 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 STRNO43815 780 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 MT-ND3P03897 115 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 ABCD1P33897 745 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 ROR1Q01973 937 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 WSCD1Q658N2 575 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 WDR93Q6P2C0 686 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 CES3Q6UWW8 571 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 EXT2Q93063 718 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 ERLEC1Q96DZ1 483 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 XPNPEP3Q9NQH7 507 aa12.8□□□□□ -0.36
ARHGEF40-206ENST00000555232 DDX60Q8IY21 1712 aaKnown RBP12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 EIF4E1BA6NMX2 242 aaKnown RBP12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 CHRNB2P17787 502 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 ABCG1P45844 678 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 PSEN2P49810 448 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 CPT1AP50416 773 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 ADIGQ0VDE8 80 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 MAMLD1Q13495 774 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 TXNRD3NBQ6F5E7 133 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 SLC9A9Q8IVB4 645 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 A0A0G2JND7 137 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 ENO4A6NNW6 628 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 SPTLC1O15269 473 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 EIF3HO15372 352 aaKnown RBP eCLIP12.79□□□□□ -0.362e-7■■■□□ 17.4
ARHGEF40-206ENST00000555232 CHN1P15882 459 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 TAF6P49848 677 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 ATXN1P54253 815 aaKnown RBP12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 PCSK7Q16549 785 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 ZPBP2Q6X784 338 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 C3orf62Q6ZUJ4 267 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 TAS1R3Q7RTX0 852 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 PCGF5Q86SE9 256 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 MAML3Q96JK9 1138 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 SCYL1Q96KG9 808 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 CPXM1Q96SM3 734 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 MRPL45Q9BRJ2 306 aaKnown RBP12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 USP18Q9UMW8 372 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 TADA2AO75478 443 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 MIPP30301 263 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 CD52P31358 61 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 PBX3P40426 434 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 MARSP56192 900 aaKnown RBP12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 CRADDP78560 199 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 HIF1AQ16665 826 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 ZC3H12AQ5D1E8 599 aaKnown RBP12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 CFAP157Q5JU67 520 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 LRRC8CQ8TDW0 803 aa12.79□□□□□ -0.36
ARHGEF40-206ENST00000555232 ABCA3Q99758 1704 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 VNN1O95497 513 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 CD48P09326 243 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 GPD1P21695 349 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 ATP5DP30049 168 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 SSTR1P30872 391 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 PPP2R2AP63151 447 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 LMNB2Q03252 620 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 SPARCL1Q14515 664 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 SETDB1Q15047 1291 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 ZRSR2Q15696 482 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 MGAT5BQ3V5L5 792 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 C11orf63Q6NUN7 778 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 RFX8Q6ZV50 586 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 RNF135Q8IUD6 432 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 TWNKQ96RR1 684 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 ATXN3LQ9H3M9 355 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 CDC42EP4Q9H3Q1 356 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 XPO7Q9UIA9 1087 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 GOLGA8TH3BQL2 631 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 C4BPAP04003 597 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 CDC25CP30307 473 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 GJA5P36382 358 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 DEUP1Q05D60 604 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 ASTE1Q2TB18 679 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 PTPN20Q4JDL3 420 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 TNIP3Q96KP6 325 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 MFSD14AQ96MC6 490 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 ADAM2Q99965 735 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 DDX43Q9NXZ2 648 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 CPSF2Q9P2I0 782 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 IL18RAPO95256 599 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 LYPLA2O95372 231 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms