RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ZCWPW1Q9H0M4 648 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 KCND1Q9NSA2 647 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 GUCA1BQ9UMX6 200 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.41□□□□□ -0.58
TDP1-211ENST00000555178 SLC27A5Q9Y2P5 690 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 MYO16Q9Y6X6 1858 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 UNC80Q8N2C7 3258 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 C5orf67F2Z3F1 127 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 ZSCAN12O43309 604 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 CNPP09543 421 aaKnown RBP11.4□□□□□ -0.58
TDP1-211ENST00000555178 VDRP11473 427 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 CYP2F1P24903 491 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 ANXA13P27216 316 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 GLUD2P49448 558 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 PKDCCQ504Y2 493 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 PPP2R2DQ66LE6 453 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 ADGRD2Q7Z7M1 963 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 FBXO22Q8NEZ5 403 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 ZMIZ2Q8NF64 920 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 PIK3R5Q8WYR1 880 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 AAASQ9NRG9 546 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 MTRRQ9UBK8 725 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 CDH9Q9ULB4 789 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.4□□□□□ -0.58
TDP1-211ENST00000555178 TEX28O15482 410 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 BUB1O43683 1085 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 ZNF500O60304 480 aaPredicted RBP11.4□□□□□ -0.58
TDP1-211ENST00000555178 LPXNO60711 386 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 SEC24AO95486 1093 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 BDNFP23560 247 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 CA8P35219 290 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 ROR1Q01973 937 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 ARHGAP29Q52LW3 1261 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 GPRIN1Q7Z2K8 1008 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 MYCBPAPQ8TBZ2 947 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 GPR152Q8TDT2 470 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 NDRG1Q92597 394 aaKnown RBP11.4□□□□□ -0.58
TDP1-211ENST00000555178 SMOQ99835 787 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 TCF25Q9BQ70 676 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 C11orf70Q9BRQ4 267 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 ISCUQ9H1K1 167 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 PCDHGC3Q9UN70 934 aa11.4□□□□□ -0.58
TDP1-211ENST00000555178 RTN2O75298 545 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 GJB6O95452 261 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 CXCL14O95715 111 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 H2AFZP0C0S5 128 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 CTSAP10619 480 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 PPM1AP35813 382 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 RGS7P49802 495 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 CENPCQ03188 943 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 PDE4CQ08493 712 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 GPM6BQ13491 265 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 CNGA2Q16280 664 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 CYP4A22Q5TCH4 519 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 KIAA1841Q6NSI8 718 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 MMS22LQ6ZRQ5 1243 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 NYAP1Q6ZVC0 841 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 H2AFVQ71UI9 128 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 TMC7Q7Z402 723 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 TTC39CQ8N584 583 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 SECISBP2LQ93073 1101 aaKnown RBP11.39□□□□□ -0.59
TDP1-211ENST00000555178 LRCH3Q96II8 777 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 TTYH1Q9H313 450 aaPredicted RBP11.39□□□□□ -0.59
TDP1-211ENST00000555178 OSGEPQ9NPF4 335 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 ABI2Q9NYB9 513 aaPredicted RBP11.39□□□□□ -0.59
TDP1-211ENST00000555178 MSRAQ9UJ68 235 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 DSEQ9UL01 958 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 CAPN6Q9Y6Q1 641 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 H3BNC9 293 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 PER2O15055 1255 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 MOCS3O95396 460 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 GTF2F1P35269 517 aaKnown RBP eCLIP11.39□□□□□ -0.59
TDP1-211ENST00000555178 GPD2P43304 727 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 KRT17Q04695 432 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 ELAVL2Q12926 359 aaKnown RBP11.39□□□□□ -0.59
TDP1-211ENST00000555178 PTPN20Q4JDL3 420 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 ARHGAP17Q68EM7 881 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 ACAD10Q6JQN1 1059 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 ZNF280DQ6N043 979 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 PMF1Q6P1K2 205 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 LCLAT1Q6UWP7 414 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 CLEC20AQ6ZU45 233 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 MON1BQ7L1V2 547 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 FAM35AQ86V20 835 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 THEM5Q8N1Q8 247 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 TIFAQ96CG3 184 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 PIWIL1Q96J94 861 aaKnown RBP11.39□□□□□ -0.59
TDP1-211ENST00000555178 GOLPH3Q9H4A6 298 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 FAM124BQ9H5Z6 455 aaPredicted RBP11.39□□□□□ -0.59
TDP1-211ENST00000555178 SLC28A3Q9HAS3 691 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 MYO1AQ9UBC5 1043 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 COG5Q9UP83 839 aa11.39□□□□□ -0.59
TDP1-211ENST00000555178 MTMR11A4FU01 709 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 C2orf71A6NGG8 1288 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 PJA2O43164 708 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 MED7O43513 233 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 FAM163BP0C2L3 166 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 GZMAP12544 262 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 CPB1P15086 417 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 RRM1P23921 792 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms