RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 TSPYL1Q9H0U9 437 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 TSC2P49815 1807 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 TMEM265A0A087WTH1 108 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 BUB1BO60566 1050 aaPredicted RBP18.4■□□□□ 0.54
SHOX-204ENST00000554971 B3GAT3O94766 335 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 CST3P01034 146 aaPredicted RBP18.4■□□□□ 0.54
SHOX-204ENST00000554971 C4BPAP04003 597 aaKnown RBP18.4■□□□□ 0.54
SHOX-204ENST00000554971 ITGB3P05106 788 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 TMEM191BP0C7N4 346 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 RPL9P32969 192 aaKnown RBP18.4■□□□□ 0.54
SHOX-204ENST00000554971 GRIN2CQ14957 1233 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 SPDYCQ5MJ68 293 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 KLHL7Q8IXQ5 586 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 RNF168Q8IYW5 571 aaPredicted RBP18.4■□□□□ 0.54
SHOX-204ENST00000554971 FBXO22Q8NEZ5 403 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 GDPD5Q8WTR4 605 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 UROC1Q96N76 676 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 SAMD11Q96NU1 681 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 GPR62Q9BZJ7 368 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 UBE2TQ9NPD8 197 aaPredicted RBP18.4■□□□□ 0.54
SHOX-204ENST00000554971 AAASQ9NRG9 546 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 SPG21Q9NZD8 308 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 ADAM28Q9UKQ2 775 aa18.4■□□□□ 0.54
SHOX-204ENST00000554971 H3BNC9 293 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 TMEM189-UBE2V1I3L0A0 370 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 SPTLC1O15269 473 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 GRM6O15303 877 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 XPOTO43592 962 aaKnown RBP18.39■□□□□ 0.53
SHOX-204ENST00000554971 MTA2O94776 668 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 RB1P06400 928 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 POLR2BP30876 1174 aaKnown RBP18.39■□□□□ 0.53
SHOX-204ENST00000554971 GCLMP48507 274 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 PLCB3Q01970 1234 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 ZACNQ401N2 412 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 LRRC31Q6UY01 552 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 SV2AQ7L0J3 742 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 Q7L0L9 218 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 SPPL3Q8TCT6 385 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 ANKRD36BP1Q96IX9 119 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 FAM161BQ96MY7 647 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 ZIM3Q96PE6 472 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 FAM114A2Q9NRY5 505 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 COQ4Q9Y3A0 265 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 I3L4J1 428 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 RTN2O75298 545 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 LRRN2O75325 713 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 VNN1O95497 513 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 PPM1AP35813 382 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 MTMR3Q13615 1198 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 DCLRE1AQ6PJP8 1040 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 TAS1R1Q7RTX1 841 aa18.39■□□□□ 0.53
SHOX-204ENST00000554971 DDX27Q96GQ7 796 aaKnown RBP18.39■□□□□ 0.53
SHOX-204ENST00000554971 C11orf84Q9BUA3 381 aaPredicted RBP18.39■□□□□ 0.53
SHOX-204ENST00000554971 GOLGA6L10A0A0M3HER8 536 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 BRCC3P46736 316 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 MXI1P50539 228 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 MFAP3P55082 362 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 LILRA4P59901 499 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 GPC5P78333 572 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 ARHGAP44Q17R89 818 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 FAM71AQ8IYT1 594 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 ELMO3Q96BJ8 720 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 TMEM169Q96HH4 297 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 CAPS2Q9BXY5 557 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.38■□□□□ 0.53
SHOX-204ENST00000554971 ITGA11Q9UKX5 1188 aa18.38■□□□□ 0.53
SHOX-204ENST00000554971 HMGB1P1B2RPK0 211 aaPredicted RBP18.37■□□□□ 0.53
SHOX-204ENST00000554971 TULP2O00295 520 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 DDX3YO15523 660 aaKnown RBP18.37■□□□□ 0.53
SHOX-204ENST00000554971 MRPS25P82663 173 aaKnown RBP18.37■□□□□ 0.53
SHOX-204ENST00000554971 GPM6BQ13491 265 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 GPR153Q6NV75 609 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 FUT10Q6P4F1 479 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 B3GALT6Q96L58 329 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 HINFPQ9BQA5 517 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 COLEC11Q9BWP8 271 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 RAB17Q9H0T7 212 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 PRDM12Q9H4Q4 367 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 AGAP1Q9UPQ3 857 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 FAM187AA6NFU0 413 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 TNNC2P02585 160 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 FAM153BP0C7A2 387 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 IRAK1P51617 712 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 RNASE9P60153 205 aaKnown RBP18.37■□□□□ 0.53
SHOX-204ENST00000554971 FAM153CQ494X1 144 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 TIGD5Q53EQ6 642 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 ZNF697Q5TEC3 545 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 KRT39Q6A163 491 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 UBL4BQ8N7F7 174 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 POF1BQ8WVV4 589 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 XYLT2Q9H1B5 865 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 FAM153AQ9UHL3 310 aa18.37■□□□□ 0.53
SHOX-204ENST00000554971 UTP11Q9Y3A2 253 aaKnown RBP18.37■□□□□ 0.53
SHOX-204ENST00000554971 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.37■□□□□ 0.53
SHOX-204ENST00000554971 SRRM3A6NNA2 597 aaPredicted RBP18.36■□□□□ 0.53
SHOX-204ENST00000554971 TADA2AO75478 443 aa18.36■□□□□ 0.53
SHOX-204ENST00000554971 KRT19P08727 400 aa18.36■□□□□ 0.53
SHOX-204ENST00000554971 GBP1P32455 592 aa18.36■□□□□ 0.53
SHOX-204ENST00000554971 DRG2P55039 364 aaKnown RBP18.36■□□□□ 0.53
SHOX-204ENST00000554971 ERVFC1P60507 584 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms