RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 HAUS5O94927 633 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 MATN4O95460 622 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 GJB1P08034 283 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SLC5A1P13866 664 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF37AP17032 561 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 HDCP19113 662 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 GCSHP23434 173 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 CTGFP29279 349 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SLC7A1P30825 629 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 PHKA1P46020 1223 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SOX8P57073 446 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 CXADRP78310 365 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SLFN5Q08AF3 891 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 KIF22Q14807 665 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 BRD3Q15059 726 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 CYP2A13Q16696 494 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 PRR16Q569H4 304 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 COLEC12Q5KU26 742 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 UTP14CQ5TAP6 766 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 EMC10Q5UCC4 262 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 MICALCLQ6ZW33 695 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF365Q70YC5 407 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ADGRG3Q86Y34 549 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 KRT78Q8N1N4 520 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 FITM2Q8N6M3 262 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 CELF5Q8N6W0 485 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SUPT20HQ8NEM7 779 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 TBC1D15Q8TC07 691 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ANKS1AQ92625 1134 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 APIPQ96GX9 242 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 MRGPRX1Q96LB2 322 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 NAA15Q9BXJ9 866 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 KIAA1586Q9HCI6 787 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ADARB2Q9NS39 739 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 RLIMQ9NVW2 624 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 RNF181Q9P0P0 153 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 CFAP97Q9P2B7 532 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 KDM5DQ9BY66 1539 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 MAST3O60307 1309 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 USP19O94966 1318 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 MSH6P52701 1360 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 DEPDC5O75140 1603 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 CLIP1P30622 1438 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SCAF11Q99590 1463 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 MLH3Q9UHC1 1453 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 CDHR4A6H8M9 788 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ISM1B1AKI9 464 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 MYO1FO00160 1098 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 MASP2O00187 686 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 C1QL1O75973 258 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 AGFG2O95081 481 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ESRRBO95718 433 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ANXA1P04083 346 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 GNAI2P04899 355 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 HLA-DOAP06340 250 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 MYL3P08590 195 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 IFIT2P09913 472 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 HKR1P10072 659 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 RARBP10826 455 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 CKBP12277 381 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 NPR1P16066 1061 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 RPL17P18621 184 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 KCNJ5P48544 419 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SUMO3P55854 103 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 PSMC1P62191 440 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SIM1P81133 766 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 EXOSC9Q06265 439 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 IFIT5Q13325 482 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 OS9Q13438 667 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 BIRC2Q13490 618 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 CNGA2Q16280 664 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ABHD17BQ5VST6 288 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ZKSCAN2Q63HK3 967 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 FBXO42Q6P3S6 717 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 PDSS2Q86YH6 399 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SAMD3Q8N6K7 520 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 Q8NA96 180 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 PARD3BQ8TEW8 1205 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 KBTBD7Q8WVZ9 684 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 PHKBQ93100 1093 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SCAMP4Q969E2 229 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 FUBP1Q96AE4 644 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SLC39A13Q96H72 371 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SUCLG2Q96I99 432 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 TNIP3Q96KP6 325 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 COQ10AQ96MF6 247 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 STRBPQ96SI9 672 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 TBCBQ99426 244 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 BTBD1Q9H0C5 482 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 UNKLQ9H9P5 680 aaKnown RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF287Q9HBT7 754 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ST6GALNAC1Q9NSC7 600 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 OGDHLQ9ULD0 1010 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 PHTF1Q9UMS5 762 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SLC45A2Q9UMX9 530 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 SNX13Q9Y5W8 968 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.87□□□□□ -2.11
PRPF39-208ENST00000554785 MAST1Q9Y2H9 1570 aa1.87□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF644Q9H582 1327 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms