RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 FOXN2P32314 431 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 STAT1P42224 750 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CTCFP49711 727 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 VPS41P49754 854 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RHBDL3P58872 404 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RPS8P62241 208 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 IRX1P78414 480 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SARNPP82979 210 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ADCY2Q08462 1091 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 C19orf57Q0VDD7 668 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 BLMHQ13867 455 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 MESDQ14696 234 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 PCBP1Q15365 356 aaKnown RBP eCLIP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SHROOM1Q2M3G4 852 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 EDRF1Q3B7T1 1238 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TNFAIP8L3Q5GJ75 292 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TDRD10Q5VZ19 366 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TBC1D9BQ66K14 1250 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SPATA21Q7Z572 469 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 FRMD5Q7Z6J6 570 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF227Q86WZ6 799 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 COL23A1Q86Y22 540 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ECHDC2Q86YB7 292 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SCUBE1Q8IWY4 988 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC105Q8IYK2 499 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SUPT20HQ8NEM7 779 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TTC8Q8TAM2 541 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SLC7A14Q8TBB6 771 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 PIGOQ8TEQ8 1089 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 C1orf54Q8WWF1 131 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CTNNBL1Q8WYA6 563 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ATG4AQ8WYN0 398 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SAAL1Q96ER3 474 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TGS1Q96RS0 853 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 FAM118BQ9BPY3 351 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 PAIP2Q9BPZ3 127 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 LZTS2Q9BRK4 669 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 AARSD1Q9BTE6 412 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 WDR18Q9BV38 432 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 OSBPL1AQ9BXW6 950 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 WNT10AQ9GZT5 417 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 NSRP1Q9H0G5 558 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 DHX36Q9H2U1 1008 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC134Q9H6E4 229 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 JMJD4Q9H9V9 463 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 FBRSQ9HAH7 460 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 HAO1Q9UJM8 370 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 DNAJC12Q9UKB3 198 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TTC7AQ9ULT0 858 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 DOT1LQ8TEK3 1739 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 EP400Q96L91 3159 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SMCHD1A6NHR9 2005 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 NAV1Q8NEY1 1877 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CDK5RAP2Q96SN8 1893 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 MAST2Q6P0Q8 1798 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ROBO3Q96MS0 1386 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 NCANO14594 1321 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ROBO1Q9Y6N7 1651 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 A0A1B0GVG6 124 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ESYT2A0FGR8 921 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ANKRD34BA5PLL1 514 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 FOXN3O00409 490 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RGS13O14921 159 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 FSCN2O14926 492 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TGFB1I1O43294 461 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ADAM11O75078 769 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SPAG7O75391 227 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CBX6O95503 412 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 FTLP02792 175 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TMEM253P0C7T8 217 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 FGFR1P11362 822 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 BRAFP15056 766 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 AKR1B1P15121 316 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RAG1P15918 1043 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 GNAZP19086 355 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 COMTP21964 271 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 BTDP43251 543 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RAB27AP51159 221 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CYP2J2P51589 502 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 AFF1P51825 1210 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RAD23BP54727 409 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 NPEPPSP55786 919 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SESN3P58005 492 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 PICALMQ13492 652 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 DHX34Q14147 1143 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RRP1BQ14684 758 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 NFIXQ14938 502 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SEPT2Q15019 361 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SF3B3Q15393 1217 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 NKG7Q16617 165 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 KYNUQ16719 465 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 PRR16Q569H4 304 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 HP1BP3Q5SSJ5 553 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 HYIQ5T013 277 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 DAB2IPQ5VWQ8 1189 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ARMC3Q5W041 872 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ANO7Q6IWH7 933 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF449Q6P9G9 518 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 FOXR2Q6PJQ5 311 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 DPP8Q6V1X1 898 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms