RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ZNF263O14978 683 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 CHADO15335 359 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 NCAM2O15394 837 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 PHACTR2O75167 634 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 F11P03951 625 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 C4BPAP04003 597 aaKnown RBP11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 CYP2F1P24903 491 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 GDI1P31150 447 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 NBL1P41271 181 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 CASP4P49662 377 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 NLRP12P59046 1061 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 MYL6P60660 151 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 ANGPT1Q15389 498 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 ZACNQ401N2 412 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 ARHGAP29Q52LW3 1261 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 C1orf228Q6PIY5 440 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 ZNF852Q6ZMS4 543 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 TMEM150AQ86TG1 271 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 YAF2Q8IY57 180 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 MYCBPAPQ8TBZ2 947 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 GIPC2Q8TF65 315 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 MARVELD3Q96A59 401 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 CLDN23Q96B33 292 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 SPATA17Q96L03 361 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 FOXQ1Q9C009 403 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 SNX25Q9H3E2 840 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 LTB4R2Q9NPC1 389 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 HEBP1Q9NRV9 189 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 FAM86C1Q9NVL1 165 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 MAGEC2Q9UBF1 373 aaPredicted RBP11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 FAM186AA6NE01 2351 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 MYH10P35580 1976 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 CHD8Q9HCK8 2581 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 HCRTO43612 131 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 DCNP07585 359 aaKnown RBP11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 NR2F2P24468 414 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 LMO2P25791 158 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 RPL13P26373 211 aaKnown RBP11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 RPS9P46781 194 aaKnown RBP11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 CYP4F8P98187 520 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 BIRC3Q13489 604 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 NCOA4Q13772 614 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 UBXN2BQ14CS0 331 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 DDR2Q16832 855 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 ZNF699Q32M78 642 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 EDRF1Q3B7T1 1238 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 ZCWPW2Q504Y3 356 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 COBLL1Q53SF7 1204 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 INTS8Q75QN2 995 aaKnown RBP11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 CMTM8Q8IZV2 173 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 CELF5Q8N6W0 485 aaKnown RBP11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 ENGASEQ8NFI3 743 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 MRPS31Q92665 395 aaKnown RBP11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 TAF4BQ92750 862 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 MYLPFQ96A32 169 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 RSPRY1Q96DX4 576 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 PCED1BQ96HM7 432 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 GSDMAQ96QA5 445 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 MRPL45Q9BRJ2 306 aaKnown RBP11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 IER2Q9BTL4 223 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 BCO2Q9BYV7 579 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 GTPBP4Q9BZE4 634 aaKnown RBP11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 KIF9Q9HAQ2 790 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 CRTAC1Q9NQ79 661 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 RMND1Q9NWS8 449 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 EHD2Q9NZN4 543 aa11.11□□□□□ -0.63
PTCD2P1-201ENST00000554393 SHISA7A6NL88 538 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 FAM170BA6NMN3 283 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 SLC38A8A6NNN8 435 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 TRIM66O15016 1216 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 ATP2C2O75185 946 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 VNN1O95497 513 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 PRAMEF12O95522 483 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 PDGFRBP09619 1106 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 P4HA1P13674 534 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 PFKLP17858 780 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 TARSP26639 723 aaKnown RBP11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 AVPR1AP37288 418 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 GPR15P49685 360 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 CDR1P51861 262 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 MCCD1P59942 119 aaPredicted RBP11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 PSMC1P62191 440 aaKnown RBP11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 DLG4P78352 724 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 FAM160A1Q05DH4 1040 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 ZNF268Q14587 947 aaPredicted RBP11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 CCDC142Q17RM4 750 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 SGSM1Q2NKQ1 1148 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 ZNF667Q5HYK9 610 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 CEP135Q66GS9 1140 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 SMYD5Q6GMV2 418 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 MON1AQ86VX9 555 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 C1orf210Q8IVY1 113 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 ELOA2Q8IYF1 753 aaPredicted RBP11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 ZNF687Q8N1G0 1237 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 B3GALNT2Q8NCR0 500 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 OR6B3Q8NGW1 331 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 SPATA20Q8TB22 786 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 BPIFB1Q8TDL5 484 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms