RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TNNT1P13805 278 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 RRM1P23921 792 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 ADORA2BP29275 332 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 PBX3P40426 434 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 CREMQ03060 361 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 PDE4CQ08493 712 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 ZNF268Q14587 947 aaPredicted RBP8.08□□□□□ -1.12
TDP1-209ENST00000554180 CFAP221Q4G0U5 840 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 CTXN3Q4LDR2 81 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 RTP2Q5QGT7 225 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 SLC8B1Q6J4K2 584 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 C11orf63Q6NUN7 778 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 CLEC20AQ6ZU45 233 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 PAQR9Q6ZVX9 377 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 TMCO2Q7Z6W1 182 aaPredicted RBP8.08□□□□□ -1.12
TDP1-209ENST00000554180 TMEM110Q86TL2 294 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 DDX53Q86TM3 631 aaKnown RBP8.08□□□□□ -1.12
TDP1-209ENST00000554180 TNS4Q8IZW8 715 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 TPCN2Q8NHX9 752 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 KIF18AQ8NI77 898 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 UBA3Q8TBC4 463 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 SLC35G2Q8TBE7 412 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 ZNF564Q8TBZ8 553 aaPredicted RBP8.08□□□□□ -1.12
TDP1-209ENST00000554180 C2orf15Q8WU43 125 aaKnown RBP8.08□□□□□ -1.12
TDP1-209ENST00000554180 KCTD13Q8WZ19 329 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 MYLPFQ96A32 169 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 C18orf8Q96DM3 657 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 ARHGEF26Q96DR7 871 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 MCRS1Q96EZ8 462 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 CPXM1Q96SM3 734 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 MED10Q9BTT4 135 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 NUP85Q9BW27 656 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 PLVAPQ9BX97 442 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 SLC4A5Q9BY07 1137 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 B3GNT5Q9BYG0 378 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 SYNCQ9H7C4 482 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 CSNK1G1Q9HCP0 422 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 DMAP1Q9NPF5 467 aaPredicted RBP8.08□□□□□ -1.12
TDP1-209ENST00000554180 KRT82Q9NSB4 513 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 MTRRQ9UBK8 725 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 CYTH4Q9UIA0 394 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 SALL4Q9UJQ4 1053 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 TFR2Q9UP52 801 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 CAPN6Q9Y6Q1 641 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 TCRBV5S1A1TA0A578 114 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 CTAGE9A4FU28 777 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 SART1O43290 800 aaKnown RBP8.07□□□□□ -1.12
TDP1-209ENST00000554180 ATMINO43313 823 aaPredicted RBP8.07□□□□□ -1.12
TDP1-209ENST00000554180 BUB1O43683 1085 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 AP1G2O75843 785 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 MOCS3O95396 460 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 URODP06132 367 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 SSTR3P32745 418 aaPredicted RBP8.07□□□□□ -1.12
TDP1-209ENST00000554180 MAGEA10P43363 369 aaPredicted RBP8.07□□□□□ -1.12
TDP1-209ENST00000554180 MAGEA11P43364 429 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 NOP2P46087 812 aaKnown RBP8.07□□□□□ -1.12
TDP1-209ENST00000554180 GLUD2P49448 558 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 NAP1L1P55209 391 aaKnown RBP8.07□□□□□ -1.12
TDP1-209ENST00000554180 DSG1Q02413 1049 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 KRT17Q04695 432 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 GPR17Q13304 367 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 MAMLD1Q13495 774 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 PSMD5Q16401 504 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 ZNF569Q5MCW4 686 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 KIAA1841Q6NSI8 718 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 PMF1Q6P1K2 205 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 DNAJC24Q6P3W2 148 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 VSTM1Q6UX27 236 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 ARCQ7LC44 396 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 SLFN11Q7Z7L1 901 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 CEP57Q86XR8 500 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 XYLT1Q86Y38 959 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 DNAAF5Q86Y56 855 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 SPATA2LQ8IUW3 424 aaPredicted RBP8.07□□□□□ -1.12
TDP1-209ENST00000554180 SCML4Q8N228 414 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 SLC35F6Q8N357 371 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 LRRC57Q8N9N7 239 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 FNIP1Q8TF40 1166 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 RNPC3Q96LT9 517 aaKnown RBP8.07□□□□□ -1.12
TDP1-209ENST00000554180 CEP295NLQ96MC4 621 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 WDR24Q96S15 920 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 VN1R3Q9BXE9 311 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 IRX2Q9BZI1 471 aaPredicted RBP8.07□□□□□ -1.12
TDP1-209ENST00000554180 OSGEPQ9NPF4 335 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 ST7Q9NRC1 585 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.07□□□□□ -1.12
TDP1-209ENST00000554180 HSFX1Q9UBD0 423 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 DNAI1Q9UI46 699 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 COG5Q9UP83 839 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 LZTS1Q9Y250 596 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 SSX2IPQ9Y2D8 614 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 JRKLQ9Y4A0 524 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 PAXBP1Q9Y5B6 917 aa8.07□□□□□ -1.12
TDP1-209ENST00000554180 PTPRSQ13332 1948 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 GRID2IPA4D2P6 1211 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 SIGLEC16A6NMB1 481 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 E5RJQ4 531 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 C5orf67F2Z3F1 127 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 MYO1FO00160 1098 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 CLDN5O00501 218 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms