RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 IL1BP01584 269 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 MYL2P10916 166 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 HOXA7P31268 230 aaPredicted RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 SLC16A2P36021 539 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 PEX3P56589 373 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 YWHAGP61981 247 aaKnown RBP eCLIP9.97□□□□□ -0.81
SIX4-202ENST00000554079 FKBP3Q00688 224 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 AMPD3Q01432 767 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 CAV1Q03135 178 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 PTK6Q13882 451 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 HIC1Q14526 733 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 SUZ12Q15022 739 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 HSF5Q4G112 596 aaPredicted RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 MDH1BQ5I0G3 518 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 AKAP4Q5JQC9 854 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 SEL1L2Q5TEA6 688 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 PGM2L1Q6PCE3 622 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 EEPD1Q7L9B9 569 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 SLC13A5Q86YT5 568 aaPredicted RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 RPGRQ92834 1020 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 ATP2A3Q93084 1043 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 C12orf43Q96C57 262 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 C9orf72Q96LT7 481 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 ZNF512Q96ME7 567 aaPredicted RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 CCDC106Q9BWC9 280 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 XAB2Q9HCS7 855 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 GINM1Q9NU53 330 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 TYW1Q9NV66 732 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 KIAA1257Q9ULG3 409 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 ZBTB1Q9Y2K1 713 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 ZNF532Q9HCE3 1301 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 SCN11AQ9UI33 1791 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 ZNFX1Q9P2E3 1918 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 PCM1Q15154 2024 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 EXOC1LA0A1B0GW35 172 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 WDR91A4D1P6 747 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 MEI4A8MW99 385 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 CCDC130P13994 396 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 SLC9A1P19634 815 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 ABCB4P21439 1286 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 GABRB3P28472 473 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 MCAMP43121 646 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 BTDP43251 543 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 HADHBP55084 474 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 CDKL1Q00532 357 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 KDSRQ06136 332 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 SELENBP1Q13228 472 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 PRKG1Q13976 671 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 PRKD1Q15139 912 aaPredicted RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 LSM12Q3MHD2 195 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 C11orf63Q6NUN7 778 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 NOP9Q86U38 636 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 ZC3H3Q8IXZ2 948 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 PDZD8Q8NEN9 1154 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 GIMAP1Q8WWP7 306 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 HPS1Q92902 700 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 DCUN1D5Q9BTE7 237 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 MANSC1Q9H8J5 431 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 VPS45Q9NRW7 570 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 ASIC3Q9UHC3 531 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 TNKSO95271 1327 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 J3QRK9 145 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 TRAF5O00463 557 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 CLASP2O75122 1294 aaKnown RBP9.96□□□□□ -0.81
SIX4-202ENST00000554079 SORBS2O94875 1100 aaKnown RBP9.96□□□□□ -0.81
SIX4-202ENST00000554079 CRYZL1O95825 349 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 MSL3P1P0C860 447 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 P4HA1P13674 534 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 ATF3P18847 181 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 JAK1P23458 1154 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 ADSLP30566 484 aaPredicted RBP9.96□□□□□ -0.81
SIX4-202ENST00000554079 IREB2P48200 963 aaKnown RBP9.96□□□□□ -0.81
SIX4-202ENST00000554079 NDST2P52849 883 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 ADAM17P78536 824 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 EIF2B5Q13144 721 aaKnown RBP9.96□□□□□ -0.81
SIX4-202ENST00000554079 MTMR2Q13614 643 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 OXA1LQ15070 435 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 PDK1Q15118 436 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 LRRC41Q15345 812 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 ZYXQ15942 572 aaKnown RBP9.96□□□□□ -0.81
SIX4-202ENST00000554079 GRIK5Q16478 980 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 MOGQ16653 247 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 CCDC14Q49A88 953 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 HP1BP3Q5SSJ5 553 aaPredicted RBP9.96□□□□□ -0.81
SIX4-202ENST00000554079 KAZNQ674X7 775 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 XKR5Q6UX68 686 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 RNF207Q6ZRF8 634 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 CENPUQ71F23 418 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 PQLC1Q8N2U9 271 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 UBL4BQ8N7F7 174 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 ENAHQ8N8S7 591 aaPredicted RBP9.96□□□□□ -0.81
SIX4-202ENST00000554079 TTC13Q8NBP0 860 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 EXD1Q8NHP7 514 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 RAB3IL1Q8TBN0 382 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 TRUB1Q8WWH5 349 aaKnown RBP9.96□□□□□ -0.81
SIX4-202ENST00000554079 TANKQ92844 425 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 FBXL8Q96CD0 374 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 FAR2Q96K12 515 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 AK8Q96MA6 479 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 SYT11Q9BT88 431 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms