RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ESYT2A0FGR8 921 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 WDR27A2RRH5 827 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 MYBPHLA2RUH7 354 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 CASTOR2A6NHX0 329 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 HEPACAM2A8MVW5 462 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 PAX4O43316 350 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 EXTL3O43909 919 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 ICMTO60725 284 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 AKAP3O75969 853 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 CCDC192P0DO97 292 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 FOSL1P15407 271 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 VIPR2P41587 438 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 CCR2P41597 374 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 SOX9P48436 509 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 USP11P51784 963 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 KPNA1P52294 538 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-224ENST00000554040 NPEPPSP55786 919 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 PTENP60484 403 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 PSMC5P62195 406 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 NUCB1Q02818 461 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 TUSC3Q13454 348 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 PFKFB3Q16875 520 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-224ENST00000554040 PLK5Q496M5 336 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 PLA2G4FQ68DD2 849 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-224ENST00000554040 FERMT3Q86UX7 667 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 REXO1Q8N1G1 1221 aaKnown RBP7.58□□□□□ -1.2
ATXN3-224ENST00000554040 CSGALNACT1Q8TDX6 532 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 CCDC136Q96JN2 1154 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 CORO1BQ9BR76 489 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 TRIM56Q9BRZ2 755 aaKnown RBP7.58□□□□□ -1.2
ATXN3-224ENST00000554040 NXF3Q9H4D5 531 aaKnown RBP7.58□□□□□ -1.2
ATXN3-224ENST00000554040 DHX33Q9H6R0 707 aaKnown RBP7.58□□□□□ -1.2
ATXN3-224ENST00000554040 C6orf50Q9HD87 102 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 MTRRQ9UBK8 725 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 PARP2Q9UGN5 583 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 BACE2Q9Y5Z0 518 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 CDY1Q9Y6F8 540 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 GREB1Q4ZG55 1949 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 APC2O95996 2303 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 CHADO15335 359 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 MOSPD3O75425 235 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 ECEL1O95672 775 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 CAVIN2O95810 425 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 LRG1P02750 347 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 CAPNS1P04632 268 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 ADH5P11766 374 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 ARF4P18085 180 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-224ENST00000554040 CHMLP26374 656 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 GNA11P29992 359 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 ELF1P32519 619 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 PXNP49023 591 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-224ENST00000554040 POU5F1BQ06416 359 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 Q4G0T1 1027 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 CYP4A22Q5TCH4 519 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 APOA5Q6Q788 366 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 PDZD4Q76G19 769 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-224ENST00000554040 PDZD3Q86UT5 571 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 RALGPS2Q86X27 583 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-224ENST00000554040 ZNF461Q8TAF7 563 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 ZSCAN18Q8TBC5 510 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-224ENST00000554040 TCP11Q8WWU5 503 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 E2F7Q96AV8 911 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 CEP170P1Q96L14 293 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 DUSP15Q9H1R2 295 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-224ENST00000554040 CLEC4MQ9H2X3 399 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-224ENST00000554040 LIN7BQ9HAP6 207 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 EGFL7Q9UHF1 273 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 RBM8AQ9Y5S9 174 aaKnown RBP7.57□□□□□ -1.2
ATXN3-224ENST00000554040 ACTL7BQ9Y614 415 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 ASCC3Q8N3C0 2202 aaKnown RBP7.57□□□□□ -1.2
ATXN3-224ENST00000554040 ZMYM2Q9UBW7 1377 aa7.57□□□□□ -1.2
ATXN3-224ENST00000554040 URB1O60287 2271 aaKnown RBP7.56□□□□□ -1.2
ATXN3-224ENST00000554040 A0A1B0GUA9 196 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 BCLAF3A2AJT9 711 aaKnown RBP7.56□□□□□ -1.2
ATXN3-224ENST00000554040 FAM221BA6H8Z2 402 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 SLC38A8A6NNN8 435 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 SPECC1L-ADORA2AF8WAN1 911 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 INO80B-WBP1J3KQ70 363 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 CDX4O14627 284 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-224ENST00000554040 SGSM2O43147 1006 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 ZBTB43O43298 467 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 RHOBTB1O94844 696 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 ABLIM3O94929 683 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 NPTXRO95502 500 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 THP07101 528 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 MAOBP27338 520 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 QARSP47897 775 aaKnown RBP7.56□□□□□ -1.2
ATXN3-224ENST00000554040 CREB5Q02930 508 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 MBTD1Q05BQ5 628 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 FCHO2Q0JRZ9 810 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 MXD4Q14582 209 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-224ENST00000554040 PON2Q15165 354 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 NFKBIBQ15653 356 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 CPSF6Q16630 551 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-224ENST00000554040 KIAA1211LQ6NV74 962 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 SLC27A1Q6PCB7 646 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 C19orf48Q6RUI8 117 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 ANKS3Q6ZW76 656 aa7.56□□□□□ -1.2
ATXN3-224ENST00000554040 PROSER1Q86XN7 944 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms