RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 FUKQ8N0W3 1084 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 TRIM58Q8NG06 486 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 OR10T2Q8NGX3 314 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 OLIG1Q8TAK6 271 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 C2orf15Q8WU43 125 aaKnown RBP11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 PIK3R5Q8WYR1 880 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 CLP1Q92989 425 aaKnown RBP11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 MYLPFQ96A32 169 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 PCED1BQ96HM7 432 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 FUBP3Q96I24 572 aaKnown RBP eCLIP11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 HSFY1Q96LI6 401 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 C16orf45Q96MC5 204 aaPredicted RBP11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 SAMD11Q96NU1 681 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 RTP3Q9BQQ7 232 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 PLVAPQ9BX97 442 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 PACSIN1Q9BY11 444 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 B3GNT5Q9BYG0 378 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 UBXN6Q9BZV1 441 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 LRRC4Q9HBW1 653 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 CYLDQ9NQC7 956 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 AVENQ9NQS1 362 aaPredicted RBP11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 MRPL17Q9NRX2 175 aaKnown RBP11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 UVRAGQ9P2Y5 699 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 LCMT1Q9UIC8 334 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 PCDHB5Q9Y5E4 795 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 TRIP11Q15643 1979 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 TDRD15B5MCY1 1934 aaKnown RBP11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 RCCD1A6NED2 376 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 CLDN5O00501 218 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 C2CD2LO14523 706 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 CYP1A2P05177 515 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 RB1P06400 928 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 TNNT1P13805 278 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 CA8P35219 290 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 RGS19P49795 217 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 ETF1P62495 437 aaKnown RBP11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 DSG1Q02413 1049 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 GPR17Q13304 367 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 PDCLQ13371 301 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 TCEAL1Q15170 157 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 ZNF569Q5MCW4 686 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 RTP2Q5QGT7 225 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 C9orf50Q5SZB4 431 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 KIAA0319Q5VV43 1072 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 DNAJC24Q6P3W2 148 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 DCUN1D2Q6PH85 259 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 VSTM1Q6UX27 236 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 MON1BQ7L1V2 547 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 TAS1R1Q7RTX1 841 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 FAM35AQ86V20 835 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 TTC30AQ86WT1 665 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 ZDHHC17Q8IUH5 632 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 SYCE1Q8N0S2 351 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 VPS52Q8N1B4 723 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 WDTC1Q8N5D0 677 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 SLC35G2Q8TBE7 412 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 SPPL2BQ8TCT7 592 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 BCL7CQ8WUZ0 217 aaPredicted RBP11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 SLC35F5Q8WV83 523 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 UBE2Q2Q8WVN8 375 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 LPIN3Q9BQK8 851 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 SELENOOQ9BVL4 669 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 DMAP1Q9NPF5 467 aaPredicted RBP11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 CHST7Q9NS84 486 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 KRT82Q9NSB4 513 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 ABI2Q9NYB9 513 aaPredicted RBP11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 MTRRQ9UBK8 725 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 MSRAQ9UJ68 235 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 PAXBP1Q9Y5B6 917 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 PCDHA11Q9Y5I1 949 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 DUSP10Q9Y6W6 482 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 LTBP2Q14767 1821 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 SCN1AP35498 2009 aa11.04□□□□□ -0.64
TMEM55B-205ENST00000554028 BRCA2P51587 3418 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 FAM170AA1A519 330 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 SART1O43290 800 aaKnown RBP11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 BUB1O43683 1085 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 BDNFP23560 247 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 RRM1P23921 792 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 CASQ1P31415 396 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 GRIK1P39086 918 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 PLA2G4AP47712 749 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 GABRB2P47870 512 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 RGS7P49802 495 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 RABGGTBP53611 331 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 MAP3K7CLP57077 242 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 UBE3AQ05086 875 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 RAB30Q15771 203 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 CFAP221Q4G0U5 840 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 PTPN20Q4JDL3 420 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 PKDCCQ504Y2 493 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 OR6B2Q6IFH4 312 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 PRSS55Q6UWB4 352 aaPredicted RBP11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 TMC7Q7Z402 723 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 TMEM110Q86TL2 294 aa11.03□□□□□ -0.64
TMEM55B-205ENST00000554028 LRRTM3Q86VH5 581 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms