RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 TRMT2BQ96GJ1 504 aaKnown RBP12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 MYRFLQ96LU7 910 aa12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 CYP2S1Q96SQ9 504 aa12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 SNX25Q9H3E2 840 aa12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 PRMT8Q9NR22 394 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 RBM12Q9NTZ6 932 aaKnown RBP12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 TDP1Q9NUW8 608 aa12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 THG1LQ9NWX6 298 aaKnown RBP12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 ZSCAN32Q9NX65 697 aa12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 USP25Q9UHP3 1055 aa12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 MYO16Q9Y6X6 1858 aa12.71□□□□□ -0.37
TRAPPC6B-204ENST00000554018 SOBPA7XYQ1 873 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 PHACTR2O75167 634 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 TACC1O75410 805 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 GRIK1P39086 918 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 SYKP43405 635 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 TNNC1P63316 161 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 PSMD2Q13200 908 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 GAS6Q14393 721 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 PON2Q15165 354 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 ITPRIPL2Q3MIP1 535 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 MDH1BQ5I0G3 518 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 TRIM68Q6AZZ1 485 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 SUMF1Q8NBK3 374 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 ZBTB44Q8NCP5 570 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 OR6B3Q8NGW1 331 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 RIN3Q8TB24 985 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 NELL1Q92832 810 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 ELMO3Q96BJ8 720 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 MSANTD3Q96H12 275 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 PCED1BQ96HM7 432 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 SLC22A12Q96S37 553 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 FAM83CQ9BQN1 747 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 XYLT2Q9H1B5 865 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 KCTD10Q9H3F6 313 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 DPEP3Q9H4B8 488 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 TRPC7Q9HCX4 862 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 DMAC2Q9NW81 257 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 UXTQ9UBK9 157 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 NXF1Q9UBU9 619 aaKnown RBP12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 PCDHGA2Q9Y5H1 932 aa12.7□□□□□ -0.38
TRAPPC6B-204ENST00000554018 FAM237AA0A1B0GTK4 181 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 OTOL1A6NHN0 477 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 LRRIQ3A6PVS8 624 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 STAU1O95793 577 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 NR3C1P04150 777 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 RPN1P04843 607 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 TDGF1P13385 188 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 PTPN1P18031 435 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 USP46P62068 366 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 BIRC3Q13489 604 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 LRRC32Q14392 662 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 ZNF268Q14587 947 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 MAPRE1Q15691 268 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 TDRD10Q5VZ19 366 aaKnown RBP12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 C1orf228Q6PIY5 440 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 VSTM1Q6UX27 236 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 MAMSTRQ6ZN01 415 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 Q6ZS52 159 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 SLC9A9Q8IVB4 645 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 DCLK2Q8N568 766 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 FSIP1Q8NA03 581 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 TTC16Q8NEE8 873 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 PARD3BQ8TEW8 1205 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 SPATA17Q96L03 361 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 IER2Q9BTL4 223 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 EBF3Q9H4W6 596 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 HPS4Q9NQG7 708 aa12.69□□□□□ -0.38
TRAPPC6B-204ENST00000554018 MYO18AQ92614 2054 aaKnown RBP12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 TRAV19A0A0A6YYK7 116 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 C2orf78A6NCI8 922 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 F8VP50 259 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 PDXKO00764 312 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 CLSTN1O94985 981 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 VNN1O95497 513 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 C4BPAP04003 597 aaKnown RBP12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 MYL1P05976 194 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 CKMP06732 381 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 FAM163BP0C2L3 166 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 ARSAP15289 507 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 ANXA13P27216 316 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 ATICP31939 592 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 RAP1GAPP47736 663 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 CXCL12P48061 93 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 CCR3P51677 355 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 CACNA2D1P54289 1103 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 CDH8P55286 799 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 DLG4P78352 724 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 CLDN10P78369 228 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 SATB1Q01826 763 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 RUNX3Q13761 415 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 NCOA4Q13772 614 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 DGKKQ5KSL6 1271 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 CC2D1AQ6P1N0 951 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 SPEM1Q8N4L4 309 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 ARL14EPQ8N8R7 260 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 TMEM174Q8WUU8 243 aa12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 SYAP1Q96A49 352 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC6B-204ENST00000554018 HINFPQ9BQA5 517 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms