RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 DDR2Q16832 855 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 TMEM196Q5HYL7 178 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 BRAPQ7Z569 592 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 KBTBD6Q86V97 674 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 NT5DC4Q86YG4 428 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 SPATA2LQ8IUW3 424 aaPredicted RBP9.48□□□□□ -0.89
TDP1-208ENST00000553989 SCN4BQ8IWT1 228 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 CPA6Q8N4T0 437 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 CACTINQ8WUQ7 758 aaKnown RBP9.48□□□□□ -0.89
TDP1-208ENST00000553989 HVCN1Q96D96 273 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 ACCSQ96QU6 501 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 FIZ1Q96SL8 496 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 EPAS1Q99814 870 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 P2RY13Q9BPV8 354 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 FAM83CQ9BQN1 747 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 CCSER1Q9C0I3 900 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 IKZF4Q9H2S9 585 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 TMLHEQ9NVH6 421 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 DUS2Q9NX74 493 aaKnown RBP9.48□□□□□ -0.89
TDP1-208ENST00000553989 DDX43Q9NXZ2 648 aaKnown RBP9.48□□□□□ -0.89
TDP1-208ENST00000553989 RBAKQ9NYW8 714 aaPredicted RBP9.48□□□□□ -0.89
TDP1-208ENST00000553989 AGAP1Q9UPQ3 857 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 ANK1P16157 1881 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 CACNA1BQ00975 2339 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 TRAV19A0A0A6YYK7 116 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 GOLGA8IPA6NC78 632 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 OTOL1A6NHN0 477 aaPredicted RBP9.47□□□□□ -0.89
TDP1-208ENST00000553989 GOLGA8JA6NMD2 632 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 TRDMT1O14717 391 aaKnown RBP9.47□□□□□ -0.89
TDP1-208ENST00000553989 EPN2O95208 641 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 F11P03951 625 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 TMEM191BP0C7N4 346 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 C7P10643 843 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 HMGA1P17096 107 aaKnown RBP9.47□□□□□ -0.89
TDP1-208ENST00000553989 DRD1P21728 446 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 CYP2F1P24903 491 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 GBP1P32455 592 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 MPLP40238 635 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 POU5F1Q01860 360 aaKnown RBP9.47□□□□□ -0.89
TDP1-208ENST00000553989 FAM160A1Q05DH4 1040 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 KCNB1Q14721 858 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 ELF2Q15723 593 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 FBXO43Q4G163 708 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 INTS6LQ5JSJ4 861 aaKnown RBP9.47□□□□□ -0.89
TDP1-208ENST00000553989 RRAGBQ5VZM2 374 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 ZNF720Q7Z2F6 126 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 TMEM150AQ86TG1 271 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 MON1AQ86VX9 555 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 BRSK2Q8IWQ3 736 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 ADGRF2Q8IZF7 708 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 TMEM86AQ8N2M4 240 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 PDCL2Q8N4E4 241 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 CSGALNACT2Q8N6G5 542 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 FSIP1Q8NA03 581 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 RPLP0P6Q8NHW5 317 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 ATP2A3Q93084 1043 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 ACDQ96AP0 544 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 EPSTI1Q96J88 318 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 LOXL4Q96JB6 756 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 ACBD6Q9BR61 282 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 PDCL3Q9H2J4 239 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 ST6GALNAC4Q9H4F1 302 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 SMOC1Q9H4F8 434 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 ECT2Q9H8V3 914 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 SEL1LQ9UBV2 794 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 STK17AQ9UEE5 414 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 GTF3C4Q9UKN8 822 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 L1RE1Q9UN81 338 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 SNX9Q9Y5X1 595 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 STYXL1Q9Y6J8 313 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 SCN1AP35498 2009 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 RALGAPA1Q6GYQ0 2036 aa9.47□□□□□ -0.89
TDP1-208ENST00000553989 KIF26AQ9ULI4 1882 aaPredicted RBP9.47□□□□□ -0.89
TDP1-208ENST00000553989 TPRP12270 2363 aaKnown RBP9.46□□□□□ -0.89
TDP1-208ENST00000553989 CCDC163A0A0D9SF12 145 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 DYNC1I1O14576 645 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 ADCY5O95622 1261 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 APBB3O95704 486 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 LDHAP00338 332 aaKnown RBP9.46□□□□□ -0.9
TDP1-208ENST00000553989 USP17L7P0C7H9 530 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 ZNF806P0C7X5 589 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 GAP43P17677 238 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 PCSK1P29120 753 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 ADSSP30520 456 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 GJA4P35212 333 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 GALK1P51570 392 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 RBP5P82980 135 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 CREB5Q02930 508 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 DNM1Q05193 864 aaKnown RBP9.46□□□□□ -0.9
TDP1-208ENST00000553989 KCNA1Q09470 495 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 NR1H3Q13133 447 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 ZNF268Q14587 947 aaPredicted RBP9.46□□□□□ -0.9
TDP1-208ENST00000553989 STPG1Q5TH74 334 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 RNF43Q68DV7 783 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 SASS6Q6UVJ0 657 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 CRELD2Q6UXH1 353 aaPredicted RBP9.46□□□□□ -0.9
TDP1-208ENST00000553989 SV2BQ7L1I2 683 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 CAMKK1Q8N5S9 505 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 LRRC52Q8N7C0 313 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 C1orf127Q8N9H9 656 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms