RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 ZCWPW1Q9H0M4 648 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 SYNCQ9H7C4 482 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 CNOT8Q9UFF9 292 aaKnown RBP12.43□□□□□ -0.42
NEK9-202ENST00000553823 CYTH4Q9UIA0 394 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 SALL4Q9UJQ4 1053 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 STRIP2Q9ULQ0 834 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 PAXBP1Q9Y5B6 917 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 GBF1Q92538 1859 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 MYO7AQ13402 2215 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 XPO1O14980 1071 aaKnown RBP12.42□□□□□ -0.42
NEK9-202ENST00000553823 ATMINO43313 823 aaPredicted RBP12.42□□□□□ -0.42
NEK9-202ENST00000553823 BUB1O43683 1085 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 MOCS3O95396 460 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 SOD2P04179 222 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 LINC00271P0C7V0 271 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 FAM200BP0CF97 657 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 TNNT1P13805 278 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 NPR3P17342 541 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 RRM1P23921 792 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 SNX16P57768 344 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 GNG11P61952 73 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 ETF1P62495 437 aaKnown RBP12.42□□□□□ -0.42
NEK9-202ENST00000553823 SHHQ15465 462 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 NFE2Q16621 373 aaPredicted RBP12.42□□□□□ -0.42
NEK9-202ENST00000553823 C2CD6Q53TS8 623 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 ZNF569Q5MCW4 686 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 KIAA1841Q6NSI8 718 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 PMF1Q6P1K2 205 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 C4orf50Q6ZRC1 276 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 DDX53Q86TM3 631 aaKnown RBP12.42□□□□□ -0.42
NEK9-202ENST00000553823 PIK3R5Q8WYR1 880 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 C18orf8Q96DM3 657 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 SMARCD1Q96GM5 515 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 CPXM1Q96SM3 734 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 HERC2P3Q9BVR0 1158 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 MIS12Q9H081 205 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 ST7Q9NRC1 585 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 CHST7Q9NS84 486 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 KRT82Q9NSB4 513 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 TMLHEQ9NVH6 421 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 CTTNBP2NLQ9P2B4 639 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 WDR35Q9P2L0 1181 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 UVRAGQ9P2Y5 699 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 STK39Q9UEW8 545 aa12.42□□□□□ -0.42
NEK9-202ENST00000553823 LCHNA4D1U4 455 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 TULP2O00295 520 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 TBC1D4O60343 1298 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 AP1G2O75843 785 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 FGF18O76093 207 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 MTA2O94776 668 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 ERBB2P04626 1255 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 OR4Q2P0C623 313 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 PLA2G4AP47712 749 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 GABRB2P47870 512 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 GLUD2P49448 558 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 RGS7P49802 495 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 HADHBP55084 474 aaKnown RBP12.41□□□□□ -0.42
NEK9-202ENST00000553823 KRT17Q04695 432 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 SLC39A12Q504Y0 691 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 CYP4A22Q5TCH4 519 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 PLEKHA7Q6IQ23 1121 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 PRSS55Q6UWB4 352 aaPredicted RBP12.41□□□□□ -0.42
NEK9-202ENST00000553823 CLEC20AQ6ZU45 233 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 PHLDB2Q86SQ0 1253 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 SPATA2LQ8IUW3 424 aaPredicted RBP12.41□□□□□ -0.42
NEK9-202ENST00000553823 TRIM58Q8NG06 486 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 RIN2Q8WYP3 895 aaPredicted RBP12.41□□□□□ -0.42
NEK9-202ENST00000553823 CALR3Q96L12 384 aaKnown RBP12.41□□□□□ -0.42
NEK9-202ENST00000553823 HSFY1Q96LI6 401 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 ALS2CR12Q96Q35 445 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 NUP85Q9BW27 656 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 MRPL47Q9HD33 250 aaKnown RBP12.41□□□□□ -0.42
NEK9-202ENST00000553823 OSGEPQ9NPF4 335 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 CYLDQ9NQC7 956 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 PARVAQ9NVD7 372 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 MTRRQ9UBK8 725 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 RWDD3Q9Y3V2 267 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 BACE2Q9Y5Z0 518 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 CAPN6Q9Y6Q1 641 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 SCINQ9Y6U3 715 aa12.41□□□□□ -0.42
NEK9-202ENST00000553823 PLXNA4Q9HCM2 1894 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 URODP06132 367 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 CPB1P15086 417 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 BDNFP23560 247 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 ACADSBP45954 432 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 RPL34P49207 117 aaKnown RBP12.4□□□□□ -0.42
NEK9-202ENST00000553823 CDR1P51861 262 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 RABGGTBP53611 331 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 GSCP56915 257 aaPredicted RBP12.4□□□□□ -0.42
NEK9-202ENST00000553823 MAP3K7CLP57077 242 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 DSG1Q02413 1049 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 SMARCB1Q12824 385 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 MAMLD1Q13495 774 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 ZNF268Q14587 947 aaPredicted RBP12.4□□□□□ -0.42
NEK9-202ENST00000553823 PSMD5Q16401 504 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 LLGL2Q6P1M3 1020 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 DNAJC24Q6P3W2 148 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 SYT10Q6XYQ8 523 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 TMEM110Q86TL2 294 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms