RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 F11P03951 625 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 ANXA13P27216 316 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 MAGEA11P43364 429 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 PFKPQ01813 784 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 LRRC63Q05C16 580 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 DPCR1Q3MIW9 517 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 KRT39Q6A163 491 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 VSTM1Q6UX27 236 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 TMEM150AQ86TG1 271 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 ACOT1Q86TX2 421 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 YAF2Q8IY57 180 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 CCDC150Q8NCX0 1101 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 NELFBQ8WX92 580 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 RSPRY1Q96DX4 576 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 MED10Q9BTT4 135 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 B3GNT5Q9BYG0 378 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 SMG9Q9H0W8 520 aaKnown RBP25.13■■□□□ 1.61
TDP1-205ENST00000553527 TICRRQ7Z2Z1 1910 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 NCANO14594 1321 aa25.12■■□□□ 1.61
TDP1-205ENST00000553527 LETM1O95202 739 aaPredicted RBP25.12■■□□□ 1.61
TDP1-205ENST00000553527 NDST1P52848 882 aa25.12■■□□□ 1.61
TDP1-205ENST00000553527 PAK1Q13153 545 aa25.12■■□□□ 1.61
TDP1-205ENST00000553527 TXNDC8Q6A555 127 aa25.12■■□□□ 1.61
TDP1-205ENST00000553527 MFSD6LQ8IWD5 586 aa25.12■■□□□ 1.61
TDP1-205ENST00000553527 ZNF518BQ9C0D4 1074 aa25.12■■□□□ 1.61
TDP1-205ENST00000553527 TRPV4Q9HBA0 871 aa25.12■■□□□ 1.61
TDP1-205ENST00000553527 APOBEC3GQ9HC16 384 aaKnown RBP25.12■■□□□ 1.61
TDP1-205ENST00000553527 HEBP1Q9NRV9 189 aa25.12■■□□□ 1.61
TDP1-205ENST00000553527 UXTQ9UBK9 157 aaPredicted RBP25.12■■□□□ 1.61
TDP1-205ENST00000553527 ANAPC1Q9H1A4 1944 aa25.12■■□□□ 1.61
TDP1-205ENST00000553527 BICDL2A1A5D9 508 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 F8VP50 259 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 ZNF263O14978 683 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 NOL4O94818 638 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 AOC1P19801 751 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 CD72P21854 359 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 GTF2H1P32780 548 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 ASPAP45381 313 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 MXI1P50539 228 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 CACNA2D1P54289 1103 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 STX17P56962 302 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 NOP14P78316 857 aaKnown RBP25.11■■□□□ 1.61
TDP1-205ENST00000553527 ENPEPQ07075 957 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 MLF2Q15773 248 aaPredicted RBP25.11■■□□□ 1.61
TDP1-205ENST00000553527 STX1AQ16623 288 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 PRSS33Q8NF86 280 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 MRPS31Q92665 395 aaKnown RBP25.11■■□□□ 1.61
TDP1-205ENST00000553527 SEMA4DQ92854 862 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 FAM122AQ96E09 287 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 SHDQ96IW2 340 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 TNIP3Q96KP6 325 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 FOXQ1Q9C009 403 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 TRPC7Q9HCX4 862 aa25.11■■□□□ 1.61
TDP1-205ENST00000553527 TRIM66O15016 1216 aa25.1■■□□□ 1.61
TDP1-205ENST00000553527 SLC16A3O15427 465 aaKnown RBP25.1■■□□□ 1.61
TDP1-205ENST00000553527 STX10O60499 249 aa25.1■■□□□ 1.61
TDP1-205ENST00000553527 CD58P19256 250 aa25.1■■□□□ 1.61
TDP1-205ENST00000553527 IFRD2Q12894 506 aaPredicted RBP25.1■■□□□ 1.61
TDP1-205ENST00000553527 DEPDC1BQ8WUY9 529 aa25.1■■□□□ 1.61
TDP1-205ENST00000553527 IRF7Q92985 503 aa25.1■■□□□ 1.61
TDP1-205ENST00000553527 E2F7Q96AV8 911 aa25.1■■□□□ 1.61
TDP1-205ENST00000553527 KCNH6Q9H252 994 aa25.1■■□□□ 1.61
TDP1-205ENST00000553527 ANO10Q9NW15 660 aa25.1■■□□□ 1.61
TDP1-205ENST00000553527 HMGXB4Q9UGU5 601 aa25.1■■□□□ 1.61
TDP1-205ENST00000553527 ARMCX3Q9UH62 379 aaPredicted RBP25.1■■□□□ 1.61
TDP1-205ENST00000553527 MIA3Q5JRA6 1907 aa25.1■■□□□ 1.61
TDP1-205ENST00000553527 PRAMEF12O95522 483 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 DCNP07585 359 aaKnown RBP25.09■■□□□ 1.61
TDP1-205ENST00000553527 AVPR1AP37288 418 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 USP46P62068 366 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 TPRG1Q6ZUI0 275 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 DENND5BQ6ZUT9 1274 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 ZC3H3Q8IXZ2 948 aaKnown RBP25.09■■□□□ 1.61
TDP1-205ENST00000553527 CMTM8Q8IZV2 173 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 FBXL13Q8NEE6 735 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 TTC16Q8NEE8 873 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 TRMT2BQ96GJ1 504 aaKnown RBP25.09■■□□□ 1.61
TDP1-205ENST00000553527 SPATA17Q96L03 361 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 MYRFLQ96LU7 910 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 LRRC3BQ96PB8 259 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 DUSP9Q99956 384 aaKnown RBP25.09■■□□□ 1.61
TDP1-205ENST00000553527 ELOVL4Q9GZR5 314 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 RAB20Q9NX57 234 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 SIT1Q9Y3P8 196 aa25.09■■□□□ 1.61
TDP1-205ENST00000553527 ARIH1Q9Y4X5 557 aaPredicted RBP25.09■■□□□ 1.61
TDP1-205ENST00000553527 SYCE3A1L190 88 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 STARD6P59095 220 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 TYRO3Q06418 890 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 UBXN2BQ14CS0 331 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 CCDC40Q4G0X9 1142 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 CBWD6Q4V339 395 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 CBWD3Q5JTY5 395 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 CBWD5Q5RIA9 395 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 PHLDB3Q6NSJ2 640 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 C12orf29Q8N999 325 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 ZFYVE19Q96K21 471 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 KCNK16Q96T55 309 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 BCO2Q9BYV7 579 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 FAM49BQ9NUQ9 324 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 TMEM30AQ9NV96 361 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms