RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 A8MXQ7 604 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 TRIM66O15016 1216 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 LAMTOR5O43504 91 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 CLSTN1O94985 981 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 VNN1O95497 513 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 P4HA1P13674 534 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 PTPN1P18031 435 aaKnown RBP13.82□□□□□ -0.2
ACTN1-207ENST00000553290 NR2F2P24468 414 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 KPNA1P52294 538 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-207ENST00000553290 DLG4P78352 724 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 FZD5Q13467 585 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 ZACNQ401N2 412 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 MDH1BQ5I0G3 518 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 TXNDC8Q6A555 127 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 ZC3H14Q6PJT7 736 aaKnown RBP13.82□□□□□ -0.2
ACTN1-207ENST00000553290 INTS8Q75QN2 995 aaKnown RBP13.82□□□□□ -0.2
ACTN1-207ENST00000553290 FMR1NBQ8N0W7 255 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-207ENST00000553290 TAF4BQ92750 862 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 NKD2Q969F2 451 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-207ENST00000553290 SEMA4AQ9H3S1 761 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 TDP1Q9NUW8 608 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 RMND1Q9NWS8 449 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 EHD2Q9NZN4 543 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 FBXO4Q9UKT5 387 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 NDRG2Q9UN36 371 aaKnown RBP13.82□□□□□ -0.2
ACTN1-207ENST00000553290 MAPK8IP1Q9UQF2 711 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 ZFHX2Q9C0A1 2572 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-207ENST00000553290 GREB1Q4ZG55 1949 aa13.82□□□□□ -0.2
ACTN1-207ENST00000553290 PATJQ8NI35 1801 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 TADA3O75528 432 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 SP9P0CG40 484 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 KRT13P13646 458 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 CCNE1P24864 410 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 PSMC2P35998 433 aaKnown RBP13.81□□□□□ -0.2
ACTN1-207ENST00000553290 VAMP7P51809 220 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 ENPEPQ07075 957 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 ADAM9Q13443 819 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 ZNF268Q14587 947 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-207ENST00000553290 ZNF528Q3MIS6 628 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 DENND5BQ6ZUT9 1274 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 SV2AQ7L0J3 742 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 ZNF687Q8N1G0 1237 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 B3GALNT2Q8NCR0 500 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 USP13Q92995 863 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-207ENST00000553290 TNIP3Q96KP6 325 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 C8orf48Q96LL4 319 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 IER2Q9BTL4 223 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 ELOVL4Q9GZR5 314 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 DPEP3Q9H4B8 488 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 SMYD3Q9H7B4 428 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 NME7Q9Y5B8 376 aa13.81□□□□□ -0.2
ACTN1-207ENST00000553290 TRAV19A0A0A6YYK7 116 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 PRR23AA6NEV1 266 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 AKAP3O75969 853 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 USP17L7P0C7H9 530 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 PDE6CP51160 858 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 CDH8P55286 799 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 NOP14P78316 857 aaKnown RBP13.8□□□□□ -0.2
ACTN1-207ENST00000553290 FAM160A1Q05DH4 1040 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 PNOCQ13519 176 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 EDRF1Q3B7T1 1238 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 ITPRIPL2Q3MIP1 535 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 ZCWPW2Q504Y3 356 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 C1orf220Q5T0J3 134 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 MAMSTRQ6ZN01 415 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 RALGPS2Q86X27 583 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-207ENST00000553290 FAM186BQ8IYM0 893 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 MAML2Q8IZL2 1156 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-207ENST00000553290 ENGASEQ8NFI3 743 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 ZFYVE19Q96K21 471 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 TIGD1Q96MW7 591 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 GSDMAQ96QA5 445 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 TTLL2Q9BWV7 592 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 GTPBP4Q9BZE4 634 aaKnown RBP13.8□□□□□ -0.2
ACTN1-207ENST00000553290 IMPG2Q9BZV3 1241 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 SMG9Q9H0W8 520 aaKnown RBP13.8□□□□□ -0.2
ACTN1-207ENST00000553290 CHRDQ9H2X0 955 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 TRPC7Q9HCX4 862 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 GKN1Q9NS71 199 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 GTSE1Q9NYZ3 720 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 HOOK1Q9UJC3 728 aaKnown RBP13.8□□□□□ -0.2
ACTN1-207ENST00000553290 CCL26Q9Y258 94 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 MYO15AQ9UKN7 3530 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 ATP8B3O60423 1300 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 KIF26AQ9ULI4 1882 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-207ENST00000553290 ANAPC1Q9H1A4 1944 aa13.8□□□□□ -0.2
ACTN1-207ENST00000553290 F8VP50 259 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 SPECC1L-ADORA2AF8WAN1 911 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 SMC2O95347 1197 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 ASS1P00966 412 aaKnown RBP13.79□□□□□ -0.2
ACTN1-207ENST00000553290 HLA-DRAP01903 254 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 PFKLP17858 780 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 CTHP32929 405 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 PIK3CAP42336 1068 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 PPP3CCP48454 512 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 LRRC32Q14392 662 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 COBLL1Q53SF7 1204 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 CC2D1AQ6P1N0 951 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-207ENST00000553290 SCARA5Q6ZMJ2 495 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 ASCL5Q7RTU5 278 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms