RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 CCDC12Q8WUD4 166 aaPredicted RBP5.65□□□□□ -1.5
CKAP4-203ENST00000553039 SH2D3AQ9BRG2 576 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 ADPGKQ9BRR6 497 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 DHX33Q9H6R0 707 aaKnown RBP5.65□□□□□ -1.5
CKAP4-203ENST00000553039 KIF9Q9HAQ2 790 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 IL21Q9HBE4 155 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 SENP2Q9HC62 589 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 SLC38A7Q9NVC3 462 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 GGT7Q9UJ14 662 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 DNMT3LQ9UJW3 386 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 FBXL5Q9UKA1 691 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 MMP17Q9ULZ9 603 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 NUB1Q9Y5A7 615 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 SLC12A7Q9Y666 1083 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 V9GY48 417 aaPredicted RBP5.65□□□□□ -1.5
CKAP4-203ENST00000553039 TICRRQ7Z2Z1 1910 aa5.65□□□□□ -1.51
CKAP4-203ENST00000553039 AHCTF1Q8WYP5 2266 aa5.65□□□□□ -1.51
CKAP4-203ENST00000553039 DOPEY1Q5JWR5 2465 aa5.65□□□□□ -1.51
CKAP4-203ENST00000553039 LAMA5O15230 3695 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 FAM149AA5PLN7 773 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 PLK4O00444 970 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 MSH4O15457 936 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 CPNE3O75131 537 aaKnown RBP5.64□□□□□ -1.51
CKAP4-203ENST00000553039 PLEKHA8P1O95397 391 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 CER1O95813 267 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 AFPP02771 609 aaKnown RBP5.64□□□□□ -1.51
CKAP4-203ENST00000553039 CPB1P15086 417 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 DDX6P26196 483 aaKnown RBP eCLIP5.64□□□□□ -1.51
CKAP4-203ENST00000553039 GABRR2P28476 465 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 QARSP47897 775 aaKnown RBP5.64□□□□□ -1.51
CKAP4-203ENST00000553039 TUFMP49411 452 aaKnown RBP5.64□□□□□ -1.51
CKAP4-203ENST00000553039 CLCNKBP51801 687 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 TMPRSS3P57727 454 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 TLE3Q04726 772 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 SCRN1Q12765 414 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 LY6DQ14210 128 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 VEPH1Q14D04 833 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 RTP5Q14D33 572 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 UGCGQ16739 394 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 TBCELQ5QJ74 424 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 PPP4R3AQ6IN85 833 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 THSD4Q6ZMP0 1018 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 ALDH16A1Q8IZ83 802 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 CCDC33Q8N5R6 958 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 DEFB119Q8N690 84 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 TRIML1Q8N9V2 468 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 OR2I1PQ8NGU4 316 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 BICD2Q8TD16 824 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 CRYGNQ8WXF5 182 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 SLC5A5Q92911 643 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 ATP2A3Q93084 1043 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 PSMG2Q969U7 264 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 CHFRQ96EP1 664 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 IFT43Q96FT9 208 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 ZNF419Q96HQ0 510 aaPredicted RBP5.64□□□□□ -1.51
CKAP4-203ENST00000553039 SEC16BQ96JE7 1060 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 CCDC136Q96JN2 1154 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 SLC46A2Q9BY10 475 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 LRRC3Q9BY71 257 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 NFKBIZQ9BYH8 718 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 SLKQ9H2G2 1235 aaPredicted RBP5.64□□□□□ -1.51
CKAP4-203ENST00000553039 UNC45AQ9H3U1 944 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 ECT2Q9H8V3 914 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 METTL14Q9HCE5 456 aaKnown RBP5.64□□□□□ -1.51
CKAP4-203ENST00000553039 HPS4Q9NQG7 708 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 FSCN3Q9NQT6 498 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 TMPRSS4Q9NRS4 437 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 TM7SF3Q9NS93 570 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 TDP1Q9NUW8 608 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 DUS2Q9NX74 493 aaKnown RBP5.64□□□□□ -1.51
CKAP4-203ENST00000553039 BARHL2Q9NY43 387 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 HSFX1Q9UBD0 423 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 CACNG4Q9UBN1 327 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 FAM8A1Q9UBU6 413 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 CFAP46Q8IYW2 2715 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 KALRNO60229 2985 aa5.64□□□□□ -1.51
CKAP4-203ENST00000553039 A0A1B0GTW7 788 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 TMEM150BA6NC51 233 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 OTOL1A6NHN0 477 aaPredicted RBP5.63□□□□□ -1.51
CKAP4-203ENST00000553039 PTGESO14684 152 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 N4BP3O15049 544 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 TLX3O43711 291 aaPredicted RBP5.63□□□□□ -1.51
CKAP4-203ENST00000553039 S1PR4O95977 384 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 IL2RAP01589 272 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 PRKCBP05771 671 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 SFTPCP11686 197 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 NOS2P35228 1153 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 MATKP42679 507 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 LIFRP42702 1097 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 BRCC3P46736 316 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 IFNAR2P48551 515 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 YARSP54577 528 aaKnown RBP5.63□□□□□ -1.51
CKAP4-203ENST00000553039 NPEPPSP55786 919 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 PTH1RQ03431 593 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 MBTD1Q05BQ5 628 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 CCDC173Q0VFZ6 552 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 DUSP4Q13115 394 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 GPR17Q13304 367 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.63□□□□□ -1.51
CKAP4-203ENST00000553039 CCDC157Q569K6 752 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms