RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 MOSPD3O75425 235 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 NOL4O94818 638 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 CCDC130P13994 396 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 SIGLEC14Q08ET2 396 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 ZNF394Q53GI3 561 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 TMEM31Q5JXX7 168 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 GPR158Q5T848 1215 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 CAVIN1Q6NZI2 390 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 DENND5BQ6ZUT9 1274 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 GAREM2Q75VX8 874 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 MRPS31Q92665 395 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 FGF14Q92915 247 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 SPATA17Q96L03 361 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 C8orf48Q96LL4 319 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 TWNKQ96RR1 684 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 ARID3AQ99856 593 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 KXD1Q9BQD3 176 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 DMAP1Q9NPF5 467 aaPredicted RBP19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 ZMYM5Q9UJ78 669 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 DUSP12Q9UNI6 340 aa19.63■□□□□ 0.73
PRPF40B-216ENST00000552301 AP1G2O75843 785 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 HMGA1P17096 107 aaKnown RBP19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 ADORA2BP29275 332 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 CYP4F8P98187 520 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 TRIM67Q6ZTA4 783 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 FUKQ8N0W3 1084 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 PPM1KQ8N3J5 372 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 ZSCAN18Q8TBC5 510 aaPredicted RBP19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 SLC2A14Q8TDB8 520 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 SMARCD2Q92925 531 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 TRMT2BQ96GJ1 504 aaKnown RBP19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 IL21Q9HBE4 155 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 ZFP14Q9HCL3 533 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 GCNT4Q9P109 453 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 TMEM63CQ9P1W3 806 aa19.62■□□□□ 0.73
PRPF40B-216ENST00000552301 FAM86C2PA6NEL3 165 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 ECI2O75521 394 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 FAM200BP0CF97 657 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 SRFP11831 508 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 PRKCSHP14314 528 aaPredicted RBP19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 MAN2A1Q16706 1144 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 FAM78AQ5JUQ0 283 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 SLC44A3Q8N4M1 653 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 C12orf29Q8N999 325 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 HEXIM2Q96MH2 286 aaKnown RBP19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 ASB16Q96NS5 453 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 INTS2Q9H0H0 1204 aaKnown RBP19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 SMOC2Q9H3U7 446 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 TASP1Q9H6P5 420 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 FBXL21Q9UKT6 434 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 NFE2L3Q9Y4A8 694 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 MYH10P35580 1976 aa19.61■□□□□ 0.73
PRPF40B-216ENST00000552301 PES1O00541 588 aaKnown RBP19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 NRG2O14511 850 aaPredicted RBP19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 DPYSL4O14531 572 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 DDX6P26196 483 aaKnown RBP eCLIP19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 IFRD2Q12894 506 aaPredicted RBP19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 HSP90AA4PQ58FG1 418 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 STXBP5Q5T5C0 1151 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 IRF2BP1Q8IU81 584 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 EHBP1Q8NDI1 1231 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 ENOX1Q8TC92 643 aaKnown RBP19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 WHAMMQ8TF30 809 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 E2F7Q96AV8 911 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 ELSPBP1Q96BH3 223 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 CYFIP2Q96F07 1278 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 TMEM176AQ96HP8 235 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 MYRFLQ96LU7 910 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 ZSWIM3Q96MP5 696 aa19.6■□□□□ 0.73
PRPF40B-216ENST00000552301 TECTAO75443 2155 aa19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 TMEM221A6NGB7 291 aa19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 KCNJ18B7U540 433 aa19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 M0R296 226 aa19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 NARSO43776 548 aaKnown RBP19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 GPR37L1O60883 481 aa19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 RTN3O95197 1032 aaPredicted RBP19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 F11P03951 625 aa19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 CACNA2D1P54289 1103 aa19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 KCNJ12Q14500 433 aa19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 GBP6Q6ZN66 633 aa19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 SLITRK1Q96PX8 696 aa19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 HNRNPABQ99729 332 aaKnown RBP19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 RPP25Q9BUL9 199 aaKnown RBP19.59■□□□□ 0.73
PRPF40B-216ENST00000552301 TPM2P07951 284 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 CD19P15391 556 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 AVPR1AP37288 418 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 RAD23BP54727 409 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 TYRO3Q06418 890 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 TANGO2Q6ICL3 276 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 C11orf57Q6ZUT1 292 aaPredicted RBP19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 PAQR9Q6ZVX9 377 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 ARID3BQ8IVW6 561 aaPredicted RBP19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 YAF2Q8IY57 180 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 NUP93Q8N1F7 819 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 SLC4A11Q8NBS3 891 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 LMO3Q8TAP4 145 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 KCNK16Q96T55 309 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 TUBGCP2Q9BSJ2 902 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 CRACR2AQ9BSW2 395 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 TTLL2Q9BWV7 592 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms