RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 LRRC8DQ7L1W4 858 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 FAM214BQ7L5A3 538 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 USP38Q8NB14 1042 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 SLC35C1Q96A29 364 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 MRFAP1L1Q96HT8 127 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 ADPGKQ9BRR6 497 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 EIF2AQ9BY44 585 aaKnown RBP8.72□□□□□ -1.01
BEST3-211ENST00000552295 VPS16Q9H269 839 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 CPSF3Q9UKF6 684 aaKnown RBP8.72□□□□□ -1.01
BEST3-211ENST00000552295 PADI3Q9ULW8 664 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 ST3GAL5Q9UNP4 418 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 PIN4Q9Y237 131 aaKnown RBP8.72□□□□□ -1.01
BEST3-211ENST00000552295 ATP11BQ9Y2G3 1177 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 UMODL1Q5DID0 1318 aa8.72□□□□□ -1.01
BEST3-211ENST00000552295 ZNF233A6NK53 670 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 MEFVO15553 781 aaPredicted RBP8.71□□□□□ -1.02
BEST3-211ENST00000552295 TEX33O43247 280 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 CBFA2T2O43439 604 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 MGEA5O60502 916 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 NBNO60934 754 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 NPTXRO95502 500 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 CLTBP09497 229 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 TRIM49P0CI25 452 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 TRIM49CP0CI26 452 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 KRT13P13646 458 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 VAMP7P51809 220 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 DLG4P78352 724 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 ENPEPQ07075 957 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 PAK2Q13177 524 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 HSP90AA2PQ14568 343 aaPredicted RBP8.71□□□□□ -1.02
BEST3-211ENST00000552295 DSC3Q14574 896 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 PSMD6Q15008 389 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 DCAF4L1Q3SXM0 396 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 VWA3BQ502W6 1294 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 DCAF17Q5H9S7 520 aaPredicted RBP8.71□□□□□ -1.02
BEST3-211ENST00000552295 C1orf220Q5T0J3 134 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 LCE4AQ5TA78 99 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 APBB1IPQ7Z5R6 666 aaPredicted RBP8.71□□□□□ -1.02
BEST3-211ENST00000552295 BRSK2Q8IWQ3 736 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 SPACA3Q8IXA5 215 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 TMEM192Q8IY95 271 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 THNSL1Q8IYQ7 743 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 BHLHE22Q8NFJ8 381 aaPredicted RBP8.71□□□□□ -1.02
BEST3-211ENST00000552295 PARD3BQ8TEW8 1205 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 CCDC51Q96ER9 411 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 WNT8AQ9H1J5 351 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 TMX1Q9H3N1 280 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 NDST4Q9H3R1 872 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 HIPK3Q9H422 1215 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 CHST12Q9NRB3 414 aa8.71□□□□□ -1.02
BEST3-211ENST00000552295 RBAKQ9NYW8 714 aaPredicted RBP8.71□□□□□ -1.02
BEST3-211ENST00000552295 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.71□□□□□ -1.02
BEST3-211ENST00000552295 BRCA2P51587 3418 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 MICAL3Q7RTP6 2002 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 LRRIQ3A6PVS8 624 aaPredicted RBP8.7□□□□□ -1.02
BEST3-211ENST00000552295 AFPP02771 609 aaKnown RBP8.7□□□□□ -1.02
BEST3-211ENST00000552295 TPM2P07951 284 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 CLTAP09496 248 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 STAG3L1P0CL83 205 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 CYP2C18P33260 490 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 PBX1P40424 430 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 OSTNP61366 133 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 POU5F1Q01860 360 aaKnown RBP8.7□□□□□ -1.02
BEST3-211ENST00000552295 UBXN1Q04323 297 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 PPP3CAQ08209 521 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 ZNF252P-AS1Q0IIN9 211 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 ENOX2Q16206 610 aaKnown RBP8.7□□□□□ -1.02
BEST3-211ENST00000552295 MLANAQ16655 118 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 KYAT1Q16773 422 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 FILIP1LQ4L180 1135 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 PPM1JQ5JR12 505 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 TCERG1LQ5VWI1 586 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 TWF2Q6IBS0 349 aaKnown RBP8.7□□□□□ -1.02
BEST3-211ENST00000552295 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.7□□□□□ -1.02
BEST3-211ENST00000552295 TET1Q8NFU7 2136 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 CCDC127Q96BQ5 260 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 IFIH1Q9BYX4 1025 aaKnown RBP8.7□□□□□ -1.02
BEST3-211ENST00000552295 NXF3Q9H4D5 531 aaKnown RBP8.7□□□□□ -1.02
BEST3-211ENST00000552295 PDE11AQ9HCR9 933 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.7□□□□□ -1.02
BEST3-211ENST00000552295 LTBP2Q14767 1821 aa8.7□□□□□ -1.02
BEST3-211ENST00000552295 TTC26A0AVF1 554 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 TRIM43BA6NCK2 446 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 PES1O00541 588 aaKnown RBP8.69□□□□□ -1.02
BEST3-211ENST00000552295 KIAA0355O15063 1070 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 PARNO95453 639 aaKnown RBP8.69□□□□□ -1.02
BEST3-211ENST00000552295 CXCL10P02778 98 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 TPM3P06753 285 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 CXCL8P10145 99 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 FMO5P49326 533 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 CCL23P55773 120 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 PTPN21Q16825 1174 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 SLC10A6Q3KNW5 377 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 CBWD6Q4V339 395 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 PLEKHG4Q58EX7 1191 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 CBWD3Q5JTY5 395 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 CBWD5Q5RIA9 395 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 FKBP15Q5T1M5 1219 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 VSTM4Q8IW00 320 aa8.69□□□□□ -1.02
BEST3-211ENST00000552295 LINC01599Q8WXQ3 324 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms