RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 FBXO32Q969P5 355 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 MAGOHBQ96A72 148 aaKnown RBP8.61□□□□□ -1.03
CHPT1-208ENST00000552215 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHPT1-208ENST00000552215 FTHL17Q9BXU8 183 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 DDX47Q9H0S4 455 aaKnown RBP8.61□□□□□ -1.03
CHPT1-208ENST00000552215 MRPL47Q9HD33 250 aaKnown RBP8.61□□□□□ -1.03
CHPT1-208ENST00000552215 C2CD2Q9Y426 696 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 WDR90Q96KV7 1748 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 P4HA2O15460 535 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 MYBPC2Q14324 1141 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 CLLU1OSQ5K130 101 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 MAP3K21Q5TCX8 1036 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 ZNF280DQ6N043 979 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 FUT10Q6P4F1 479 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 CACUL1Q86Y37 369 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 GOLGA6L1Q8N7Z2 621 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 CEP41Q9BYV8 373 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 KANSL3Q9P2N6 904 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 PHF24Q9UPV7 400 aa8.61□□□□□ -1.03
CHPT1-208ENST00000552215 ZNFX1Q9P2E3 1918 aaKnown RBP8.6□□□□□ -1.03
CHPT1-208ENST00000552215 TLDC2A0PJX2 215 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 GOLGA8MH3BSY2 632 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 TBX18O95935 607 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 ATXN1P54253 815 aaKnown RBP8.6□□□□□ -1.03
CHPT1-208ENST00000552215 SF3A3Q12874 501 aaKnown RBP eCLIP8.6□□□□□ -1.03
CHPT1-208ENST00000552215 KCNT2Q6UVM3 1135 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 SND1Q7KZF4 910 aaKnown RBP eCLIP8.6□□□□□ -1.03
CHPT1-208ENST00000552215 CD302Q8IX05 232 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 REXO1L1PQ8IX06 675 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 DNAJC5GQ8N7S2 189 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 USP33Q8TEY7 942 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 ING5Q8WYH8 240 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 SHC3Q92529 594 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 CPXM1Q96SM3 734 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 CORO1BQ9BR76 489 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 ADAM33Q9BZ11 813 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 ADAM28Q9UKQ2 775 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 TSPAN3O60637 253 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 RFC1P35251 1148 aaPredicted RBP8.6□□□□□ -1.03
CHPT1-208ENST00000552215 MARCKSL1P49006 195 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 GRIK3Q13003 919 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 VARS2Q5ST30 1063 aaKnown RBP8.6□□□□□ -1.03
CHPT1-208ENST00000552215 ACAD10Q6JQN1 1059 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 PMF1Q6P1K2 205 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 TAS1R1Q7RTX1 841 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 SPRED2Q7Z698 418 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 OSTM1Q86WC4 334 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 NPAS4Q8IUM7 802 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 RYBPQ8N488 228 aaPredicted RBP8.6□□□□□ -1.03
CHPT1-208ENST00000552215 TTC9BQ8N6N2 239 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 RXFP2Q8WXD0 754 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 ATG4AQ8WYN0 398 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 PCED1BQ96HM7 432 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 RUFY1Q96T51 708 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 PLVAPQ9BX97 442 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 KIF9Q9HAQ2 790 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 CHST12Q9NRB3 414 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 SFMBT1Q9UHJ3 866 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 SALL4Q9UJQ4 1053 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 MSI1O43347 362 aaKnown RBP8.6□□□□□ -1.03
CHPT1-208ENST00000552215 VDRP11473 427 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 PBX1P40424 430 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 RAD23BP54727 409 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 SNX16P57768 344 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 PSMD5Q16401 504 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 PKN2Q16513 984 aaKnown RBP8.6□□□□□ -1.03
CHPT1-208ENST00000552215 TMC5Q6UXY8 1006 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 C12orf76Q8N812 135 aaPredicted RBP8.6□□□□□ -1.03
CHPT1-208ENST00000552215 IQCDQ96DY2 449 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 ABHD8Q96I13 439 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 WNT8AQ9H1J5 351 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 PLK2Q9NYY3 685 aa8.6□□□□□ -1.03
CHPT1-208ENST00000552215 CA3P07451 260 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 GCNT1Q02742 428 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 CBX2Q14781 532 aaPredicted RBP8.59□□□□□ -1.03
CHPT1-208ENST00000552215 VEPH1Q14D04 833 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 SH3PXD2AQ5TCZ1 1133 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 C8orf74Q6P047 294 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 PPP1R21Q6ZMI0 780 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 FAM71AQ8IYT1 594 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 DCP1BQ8IZD4 617 aaKnown RBP8.59□□□□□ -1.03
CHPT1-208ENST00000552215 USP38Q8NB14 1042 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 JOSD2Q8TAC2 188 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 RFFLQ8WZ73 363 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 DDX27Q96GQ7 796 aaKnown RBP8.59□□□□□ -1.03
CHPT1-208ENST00000552215 TMEM161AQ9NX61 479 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 REXO2Q9Y3B8 237 aaKnown RBP8.59□□□□□ -1.03
CHPT1-208ENST00000552215 SGK1O00141 431 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 ZRANB2O95218 330 aaKnown RBP eCLIP8.59□□□□□ -1.03
CHPT1-208ENST00000552215 LRG1P02750 347 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 DNAJC21Q5F1R6 531 aaKnown RBP8.59□□□□□ -1.03
CHPT1-208ENST00000552215 C12orf56Q8IXR9 622 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 SLC4A11Q8NBS3 891 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 TCF25Q9BQ70 676 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 TTPALQ9BTX7 342 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 PLEKHA5Q9HAU0 1116 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 PTPRHQ9HD43 1115 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 PAK6Q9NQU5 681 aaPredicted RBP8.59□□□□□ -1.03
CHPT1-208ENST00000552215 PARVAQ9NVD7 372 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 CCL16O15467 120 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms