RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ANKRD36BP1Q96IX9 119 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 LRRC37BQ96QE4 947 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 KLF6Q99612 283 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 INO80BQ9C086 356 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 SLC24A2Q9UI40 661 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 RABGEF1Q9UJ41 708 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 CHKBQ9Y259 395 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 FARP1Q9Y4F1 1045 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 TCRBV7S3A2A0A539 114 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 SOWAHBA6NEL2 793 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 ANP32DO95626 131 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 PAX7P23759 505 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 TARSP26639 723 aaKnown RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 NRLP54845 237 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 NAA25Q14CX7 972 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 SYCP2LQ5T4T6 812 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 DPH6Q7L8W6 267 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 POLNQ7Z5Q5 900 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 PCGF5Q86SE9 256 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 UNC45BQ8IWX7 931 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 FAM71DQ8N9W8 422 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 KCTD6Q8NC69 237 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 TMEM237Q96Q45 408 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 CPXM1Q96SM3 734 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 C12orf65Q9H3J6 166 aaKnown RBP13.68□□□□□ -0.22
CACNB3-219ENST00000551544 BTBD7Q9P203 1132 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 USH1CQ9Y6N9 552 aa13.68□□□□□ -0.22
CACNB3-219ENST00000551544 ABLIM1O14639 778 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 TYROBPO43914 113 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 EDF1O60869 148 aaKnown RBP13.67□□□□□ -0.22
CACNB3-219ENST00000551544 CCNB1P14635 433 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 PHBP35232 272 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 BASP1P80723 227 aaKnown RBP13.67□□□□□ -0.22
CACNB3-219ENST00000551544 MOGSQ13724 837 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 SURF1Q15526 300 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 SEPT7Q16181 437 aaKnown RBP13.67□□□□□ -0.22
CACNB3-219ENST00000551544 EFHC2Q5JST6 749 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 EEF1DP3Q658K8 133 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 DEFB132Q7Z7B7 95 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 PALM2Q8IXS6 379 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 TMEM192Q8IY95 271 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 ATP11CQ8NB49 1132 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 FBXO36Q8NEA4 188 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 CALN1Q9BXU9 219 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 TXLNGQ9NUQ3 528 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 SNCAIPQ9Y6H5 919 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 LCTP09848 1927 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 ERBB2P04626 1255 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 CXCL8P10145 99 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 FGFR1P11362 822 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 CCDC15Q0P6D6 951 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 ATF7IP2Q5U623 682 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 BBS12Q6ZW61 710 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 TRPM4Q8TD43 1214 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 PAFAH2Q99487 392 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 WDR83Q9BRX9 315 aaKnown RBP13.67□□□□□ -0.22
CACNB3-219ENST00000551544 NOP53Q9NZM5 478 aaKnown RBP13.67□□□□□ -0.22
CACNB3-219ENST00000551544 HAO1Q9UJM8 370 aa13.67□□□□□ -0.22
CACNB3-219ENST00000551544 SIP14410 1827 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 NDC80O14777 642 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 PPP1R12AO14974 1030 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-219ENST00000551544 TMEM63AO94886 807 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 ADRA1DP25100 572 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 ALDH3A1P30838 453 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 SLC18A1P54219 525 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 EIF3EP60228 445 aaKnown RBP13.66□□□□□ -0.22
CACNB3-219ENST00000551544 SATB1Q01826 763 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 MXD4Q14582 209 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-219ENST00000551544 HSDL1Q3SXM5 330 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 ZNF667Q5HYK9 610 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 CDCA2Q69YH5 1023 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-219ENST00000551544 ZNF449Q6P9G9 518 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 MPZL3Q6UWV2 235 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 METTL7BQ6UX53 244 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 APOBEC3FQ8IUX4 373 aaKnown RBP13.66□□□□□ -0.22
CACNB3-219ENST00000551544 NAT8LQ8N9F0 302 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 TTC13Q8NBP0 860 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 ZNF75CPQ92670 426 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-219ENST00000551544 GGA3Q9NZ52 723 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 XPO7Q9UIA9 1087 aaKnown RBP13.66□□□□□ -0.22
CACNB3-219ENST00000551544 NOP56O00567 594 aaKnown RBP13.66□□□□□ -0.22
CACNB3-219ENST00000551544 MED7O43513 233 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 ZBTB7AO95365 584 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 YARSP54577 528 aaKnown RBP13.66□□□□□ -0.22
CACNB3-219ENST00000551544 ATP11AP98196 1134 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 OTOAQ7RTW8 1153 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 XYLT1Q86Y38 959 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 TWNKQ96RR1 684 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 R3HDMLQ9H3Y0 253 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 ALG13Q9NP73 1137 aaKnown RBP13.66□□□□□ -0.22
CACNB3-219ENST00000551544 HMGXB4Q9UGU5 601 aa13.66□□□□□ -0.22
CACNB3-219ENST00000551544 PIK3R2O00459 728 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 CSDE1O75534 798 aaKnown RBP13.65□□□□□ -0.22
CACNB3-219ENST00000551544 NEBLO76041 1014 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 ARIH2O95376 493 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 CCND1P24385 295 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 MIPP30301 263 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 SKIV2L2P42285 1042 aaKnown RBP13.65□□□□□ -0.22
CACNB3-219ENST00000551544 RAD23BP54727 409 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 DLK2Q6UY11 383 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms