RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 TIGD5Q53EQ6 642 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 FAM126BQ8IXS8 530 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 IPO4Q8TEX9 1081 aaKnown RBP20.75■□□□□ 0.91
SSH1-209ENST00000551165 CLEC4CQ8WTT0 213 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 C1orf54Q8WWF1 131 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 SLC4A5Q9BY07 1137 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 MIS12Q9H081 205 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 SLITRK6Q9H5Y7 841 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 PAK6Q9NQU5 681 aaPredicted RBP20.75■□□□□ 0.91
SSH1-209ENST00000551165 RGS18Q9NS28 235 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 FAM53CQ9NYF3 392 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 HESX1Q9UBX0 185 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 SQORQ9Y6N5 450 aa20.75■□□□□ 0.91
SSH1-209ENST00000551165 C9IYK1 514 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 MAP2K7O14733 419 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 FSCN2O14926 492 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 CAND2O75155 1236 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 LRCH4O75427 683 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 ITGB1P05556 798 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 FAM153BP0C7A2 387 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 BRCC3P46736 316 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 PLA2G4AP47712 749 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 RABGGTBP53611 331 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 FAM153CQ494X1 144 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 PAQR9Q6ZVX9 377 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 IFT20Q8IY31 132 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 KATNAL2Q8IYT4 538 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 NIPA2Q8N8Q9 360 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 ATG4AQ8WYN0 398 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 KHSRPQ92945 711 aaKnown RBP eCLIP20.74■□□□□ 0.91
SSH1-209ENST00000551165 MAGOHBQ96A72 148 aaKnown RBP20.74■□□□□ 0.91
SSH1-209ENST00000551165 FAM118BQ9BPY3 351 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 FAM153AQ9UHL3 310 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 R3HDM2Q9Y2K5 976 aaKnown RBP20.74■□□□□ 0.91
SSH1-209ENST00000551165 GOLGA6L10A0A0M3HER8 536 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 PAPSS1O43252 624 aaPredicted RBP20.74■□□□□ 0.91
SSH1-209ENST00000551165 NBNO60934 754 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 BEST1O76090 585 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 FLT3P36888 993 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 CASP8Q14790 479 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 SMTNL2Q2TAL5 461 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 KCNT1Q5JUK3 1230 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 FUKQ8N0W3 1084 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 ANKRD52Q8NB46 1076 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 UBE2Q2Q8WVN8 375 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 RAPGEF5Q92565 580 aa20.74■□□□□ 0.91
SSH1-209ENST00000551165 DDX43Q9NXZ2 648 aaKnown RBP20.74■□□□□ 0.91
SSH1-209ENST00000551165 TDRD15B5MCY1 1934 aaKnown RBP20.74■□□□□ 0.91
SSH1-209ENST00000551165 BHMG1C9JSJ3 638 aaPredicted RBP20.73■□□□□ 0.91
SSH1-209ENST00000551165 DNM1LO00429 736 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 PHF2O75151 1096 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 KRT10P13645 584 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 TNNT3P45378 269 aaPredicted RBP20.73■□□□□ 0.91
SSH1-209ENST00000551165 OLFML1Q6UWY5 402 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 DSTYKQ6XUX3 929 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 LRRC8DQ7L1W4 858 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 TMEM110Q86TL2 294 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 PGBD4Q96DM1 585 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 TRIM31Q9BZY9 425 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 RNF208Q9H0X6 261 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 CRTAC1Q9NQ79 661 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 B3GAT3O94766 335 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 PTPN1P18031 435 aaKnown RBP20.73■□□□□ 0.91
SSH1-209ENST00000551165 SLC25A11Q02978 314 aaKnown RBP20.73■□□□□ 0.91
SSH1-209ENST00000551165 C15orf59Q2T9L4 293 aaPredicted RBP20.73■□□□□ 0.91
SSH1-209ENST00000551165 ZFYVE27Q5T4F4 411 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 MFSD7Q6UXD7 560 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 NEUROG2Q9H2A3 272 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 ZWILCHQ9H900 591 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 CHST7Q9NS84 486 aa20.73■□□□□ 0.91
SSH1-209ENST00000551165 DAPK3O43293 454 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 ECHS1P30084 290 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 PTGIRP43119 386 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 ATN1P54259 1190 aaPredicted RBP20.72■□□□□ 0.91
SSH1-209ENST00000551165 DR1Q01658 176 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 SNX1Q13596 522 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 TCTN1Q2MV58 587 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 MDH1BQ5I0G3 518 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 CLLU1OSQ5K130 101 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 ZNF280BQ86YH2 543 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 CCDC26Q8TAB7 109 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 RXFP2Q8WXD0 754 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 DPH5Q9H2P9 285 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 PCSK1NQ9UHG2 260 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 KRT1P04264 644 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 CCL5P13501 91 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 LCP1P13796 627 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 TNFRSF8P28908 595 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 BST2Q10589 180 aaKnown RBP20.72■□□□□ 0.91
SSH1-209ENST00000551165 SND1Q7KZF4 910 aaKnown RBP eCLIP20.72■□□□□ 0.91
SSH1-209ENST00000551165 HDXQ7Z353 690 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 MAATS1Q7Z4T9 603 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 EXD1Q8NHP7 514 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 FNIP1Q8TF40 1166 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 NDRG1Q92597 394 aaKnown RBP20.72■□□□□ 0.91
SSH1-209ENST00000551165 RUBCNQ92622 972 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 TNIP3Q96KP6 325 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 OSBPL8Q9BZF1 889 aa20.72■□□□□ 0.91
SSH1-209ENST00000551165 MYBPHLA2RUH7 354 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 C2CD4BA6NLJ0 364 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms