RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TBR1Q16650 682 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 UTP14CQ5TAP6 766 aaKnown RBP6.21□□□□□ -1.42
CPSF6-206ENST00000550987 USP37Q86T82 979 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 YAF2Q8IY57 180 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 TRAPPC12Q8WVT3 735 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 LCORQ96JN0 433 aaPredicted RBP6.21□□□□□ -1.42
CPSF6-206ENST00000550987 RMDN3Q96TC7 470 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 STK33Q9BYT3 514 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 MAGEB5Q9BZ81 275 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 DPH1Q9BZG8 443 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 SIK2Q9H0K1 926 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 ADAM7Q9H2U9 754 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 SMURF2Q9HAU4 748 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 IL23AQ9NPF7 189 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 OBP2BQ9NPH6 170 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 RLIMQ9NVW2 624 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 ZSCAN32Q9NX65 697 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 DACT1Q9NYF0 836 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 JKAMPQ9P055 326 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 SLC23A1Q9UHI7 598 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 CNOT6Q9ULM6 557 aaKnown RBP6.21□□□□□ -1.42
CPSF6-206ENST00000550987 PLEKHM1Q9Y4G2 1056 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 CRYBG1Q9Y4K1 1723 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 USP34Q70CQ2 3546 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 MBD5Q9P267 1494 aa6.21□□□□□ -1.42
CPSF6-206ENST00000550987 FASNP49327 2511 aaKnown RBP6.21□□□□□ -1.42
CPSF6-206ENST00000550987 C5orf42Q9H799 3197 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 A0A1W2PPC1 479 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 A0A1W2PRX2 142 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 ETV2O00321 342 aaPredicted RBP6.2□□□□□ -1.42
CPSF6-206ENST00000550987 AREL1O15033 823 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 AMHP03971 560 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 DHRS4L1P0CG22 281 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 PDIA3P30101 505 aaKnown RBP6.2□□□□□ -1.42
CPSF6-206ENST00000550987 ZNF135P52742 658 aaPredicted RBP6.2□□□□□ -1.42
CPSF6-206ENST00000550987 ITGA8P53708 1063 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 CLRN1P58418 232 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 CATSPERGQ6ZRH7 1159 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 MICU3Q86XE3 530 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 PDSS2Q86YH6 399 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 SLC35B2Q8TB61 432 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 MAML1Q92585 1016 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 RABGGTAQ92696 567 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 GPHA2Q96T91 129 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 TCF25Q9BQ70 676 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 NDC1Q9BTX1 674 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 TM7SF3Q9NS93 570 aa6.2□□□□□ -1.42
CPSF6-206ENST00000550987 KIAA0232Q92628 1395 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 SCN11AQ9UI33 1791 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 C9orf118A6NHY6 69 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 PRSS29PA6NIE9 313 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 HOXA3O43365 443 aaPredicted RBP6.19□□□□□ -1.42
CPSF6-206ENST00000550987 B4GALT4O60513 344 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 HAUS5O94927 633 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 ANXA1P04083 346 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 PI3P19957 117 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 KLRC1P26715 233 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 UCP3P55916 312 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 HGFACQ04756 655 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 UBXN2BQ14CS0 331 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 TAF12Q16514 161 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 ZNF365Q70YC5 407 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 FAM124AQ86V42 546 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 KBTBD2Q8IY47 623 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 ADGRG2Q8IZP9 1017 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 CLASRPQ8N2M8 674 aaKnown RBP6.19□□□□□ -1.42
CPSF6-206ENST00000550987 ZSCAN31Q96LW9 406 aaPredicted RBP6.19□□□□□ -1.42
CPSF6-206ENST00000550987 FAM167BQ9BTA0 163 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 SORBS1Q9BX66 1292 aaKnown RBP6.19□□□□□ -1.42
CPSF6-206ENST00000550987 IMPG2Q9BZV3 1241 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.19□□□□□ -1.423e-9■■□□□ 13.4
CPSF6-206ENST00000550987 MS4A7Q9GZW8 240 aaPredicted RBP6.19□□□□□ -1.42
CPSF6-206ENST00000550987 KCNH6Q9H252 994 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 CHST8Q9H2A9 424 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 TERF2IPQ9NYB0 399 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 SLC45A2Q9UMX9 530 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 BTAF1O14981 1849 aa6.19□□□□□ -1.42
CPSF6-206ENST00000550987 ARHGEF10O15013 1369 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 CDC42BPGQ6DT37 1551 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 KDM6AO15550 1401 aaPredicted RBP6.18□□□□□ -1.42
CPSF6-206ENST00000550987 MBD3L4A6NDZ8 208 aaPredicted RBP6.18□□□□□ -1.42
CPSF6-206ENST00000550987 MBD3L3A6NE82 208 aaPredicted RBP6.18□□□□□ -1.42
CPSF6-206ENST00000550987 LGALS16A8MUM7 142 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 TMEM233B4DJY2 109 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 B5MCH6 92 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 M0QYG6 137 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 RFXAPO00287 272 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 PJA2O43164 708 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 IRAK2O43187 625 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 AGFG2O95081 481 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 SLC11A2P49281 568 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 IRAK1P51617 712 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 SPARCL1Q14515 664 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 RNF151Q2KHN1 245 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 FAM26FQ5R3K3 315 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 FKBP15Q5T1M5 1219 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 DCAF12L1Q5VU92 463 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 RFX8Q6ZV50 586 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 CARFQ8N187 725 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 TCP11L2Q8N4U5 519 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms