RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 NDUFV1P49821 464 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 CACNA2D1P54289 1103 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 BCAT1P54687 386 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 CREMQ03060 361 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 PDE4CQ08493 712 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 GPR17Q13304 367 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 CAMK1Q14012 370 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 SLC18A3Q16572 532 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 NFE2Q16621 373 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-207ENST00000550504 LRIT3Q3SXY7 679 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 TRIM72Q6ZMU5 477 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 SCN4BQ8IWT1 228 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 WDTC1Q8N5D0 677 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 TTC9BQ8N6N2 239 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 ANKRD52Q8NB46 1076 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 ATAD1Q8NBU5 361 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 TMEM35BQ8NCS4 154 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 KLHL5Q96PQ7 755 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 LHX5Q9H2C1 402 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.89□□□□□ -0.67
RAB5C-207ENST00000550504 FNIP2Q9P278 1114 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 CYTH4Q9UIA0 394 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 NAGPAQ9UK23 515 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 PYCARDQ9ULZ3 195 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 PCDHB5Q9Y5E4 795 aa10.89□□□□□ -0.67
RAB5C-207ENST00000550504 LAMA2P24043 3122 aaKnown RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 EIF3CLB5ME19 914 aaKnown RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 TULP2O00295 520 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 PIK3R2O00459 728 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 DLL1O00548 723 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 SOAT2O75908 522 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 IPO7O95373 1038 aaKnown RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 VNN2O95498 520 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 LSM8O95777 96 aaKnown RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 CYP1A1P04798 512 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 SPATA31D3P0C874 917 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 UNGP13051 313 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 NPR3P17342 541 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 KLRC2P26717 231 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 GPD2P43304 727 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 NSFP46459 744 aaKnown RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 RGS7P49802 495 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 MAP3K7CLP57077 242 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 NOMO3P69849 1222 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 ADCY1Q08828 1119 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 BST2Q10589 180 aaKnown RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 DUSP4Q13115 394 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 RAB33AQ14088 237 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 SPA17Q15506 151 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 PKDCCQ504Y2 493 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 C2CD6Q53TS8 623 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 ACAD10Q6JQN1 1059 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 ALKBH5Q6P6C2 394 aaKnown RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 CLEC20AQ6ZU45 233 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 SPATA31D4Q6ZUB0 917 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 GPR65Q8IYL9 337 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 MRPL43Q8N983 215 aaKnown RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 SMARCD1Q96GM5 515 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 KCNK16Q96T55 309 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 EIF3CQ99613 913 aaKnown RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 SEPT5Q99719 369 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 SMOQ99835 787 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 EMILIN2Q9BXX0 1053 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 PACSIN1Q9BY11 444 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 DUSP16Q9BY84 665 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 RXFP1Q9HBX9 757 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 NGRNQ9NPE2 291 aaKnown RBP10.88□□□□□ -0.67
RAB5C-207ENST00000550504 ST7Q9NRC1 585 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 TMEM30AQ9NV96 361 aa10.88□□□□□ -0.67
RAB5C-207ENST00000550504 F8VP50 259 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 RTN2O75298 545 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 ABLIM3O94929 683 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 SEC24AO95486 1093 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 FTLP02792 175 aaPredicted RBP10.87□□□□□ -0.67
RAB5C-207ENST00000550504 ADH1AP07327 375 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 SETSIPP0DME0 302 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 ABCB4P21439 1286 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 CDH5P33151 784 aaPredicted RBP10.87□□□□□ -0.67
RAB5C-207ENST00000550504 GRIK1P39086 918 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 MAGEA1P43355 309 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 GPR15P49685 360 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 SLC8A3P57103 927 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 CENPCQ03188 943 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 SMARCB1Q12824 385 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 PDCLQ13371 301 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 DDR2Q16832 855 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 MGAT5BQ3V5L5 792 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 CFAP221Q4G0U5 840 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 SDHAF4Q5VUM1 108 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 GPR153Q6NV75 609 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 PMF1Q6P1K2 205 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 MMS22LQ6ZRQ5 1243 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 PHLDB2Q86SQ0 1253 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 RBM23Q86U06 439 aaKnown RBP10.87□□□□□ -0.67
RAB5C-207ENST00000550504 ZMIZ2Q8NF64 920 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 ZNF461Q8TAF7 563 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 SPPL2BQ8TCT7 592 aa10.87□□□□□ -0.67
RAB5C-207ENST00000550504 FUBP3Q96I24 572 aaKnown RBP eCLIP10.87□□□□□ -0.671e-6■■■□□ 14.6
RAB5C-207ENST00000550504 LRCH3Q96II8 777 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms