RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 FAM160A1Q05DH4 1040 aa21.29■■□□□ 1
GCN1-207ENST00000550471 BIRC3Q13489 604 aa21.29■■□□□ 1
GCN1-207ENST00000550471 SPEM1Q8N4L4 309 aa21.29■■□□□ 1
GCN1-207ENST00000550471 ZBTB44Q8NCP5 570 aa21.29■■□□□ 1
GCN1-207ENST00000550471 KIAA0895Q8NCT3 520 aa21.29■■□□□ 1
GCN1-207ENST00000550471 SECISBP2LQ93073 1101 aaKnown RBP21.29■■□□□ 1
GCN1-207ENST00000550471 TNIP3Q96KP6 325 aa21.29■■□□□ 1
GCN1-207ENST00000550471 C8orf48Q96LL4 319 aa21.29■■□□□ 1
GCN1-207ENST00000550471 GTPBP4Q9BZE4 634 aaKnown RBP21.29■■□□□ 1
GCN1-207ENST00000550471 KCTD10Q9H3F6 313 aa21.29■■□□□ 1
GCN1-207ENST00000550471 CACNA1IQ9P0X4 2223 aa21.29■■□□□ 1
GCN1-207ENST00000550471 NR3C1P04150 777 aa21.28■■□□□ 1
GCN1-207ENST00000550471 CHRNB1P11230 501 aa21.28■■□□□ 1
GCN1-207ENST00000550471 TCF3P15923 654 aa21.28■■□□□ 1
GCN1-207ENST00000550471 LMO2P25791 158 aa21.28■■□□□ 1
GCN1-207ENST00000550471 CYP27A1Q02318 531 aa21.28■■□□□ 1
GCN1-207ENST00000550471 MTAPQ13126 283 aa21.28■■□□□ 1
GCN1-207ENST00000550471 KCNB1Q14721 858 aa21.28■■□□□ 1
GCN1-207ENST00000550471 SGSM1Q2NKQ1 1148 aa21.28■■□□□ 1
GCN1-207ENST00000550471 ZNF667Q5HYK9 610 aa21.28■■□□□ 1
GCN1-207ENST00000550471 DENND5BQ6ZUT9 1274 aa21.28■■□□□ 1
GCN1-207ENST00000550471 GRAMD1CQ8IYS0 662 aa21.28■■□□□ 1
GCN1-207ENST00000550471 GPR161Q8N6U8 529 aaKnown RBP21.28■■□□□ 1
GCN1-207ENST00000550471 MYLPFQ96A32 169 aa21.28■■□□□ 1
GCN1-207ENST00000550471 FAM83CQ9BQN1 747 aa21.28■■□□□ 1
GCN1-207ENST00000550471 ZDHHC9Q9Y397 364 aa21.28■■□□□ 1
GCN1-207ENST00000550471 R4GN57 208 aa21.28■■□□□ 1
GCN1-207ENST00000550471 A8MXQ7 604 aa21.27■■□□□ 1
GCN1-207ENST00000550471 PAPSS2O95340 614 aaPredicted RBP21.27■■□□□ 1
GCN1-207ENST00000550471 PDGFRBP09619 1106 aa21.27■■□□□ 1
GCN1-207ENST00000550471 PTPN1P18031 435 aaKnown RBP21.27■■□□□ 1
GCN1-207ENST00000550471 CXCL12P48061 93 aa21.27■■□□□ 1
GCN1-207ENST00000550471 NOP14P78316 857 aaKnown RBP21.27■■□□□ 1
GCN1-207ENST00000550471 ZNF699Q32M78 642 aa21.27■■□□□ 1
GCN1-207ENST00000550471 TXNDC8Q6A555 127 aa21.27■■□□□ 1
GCN1-207ENST00000550471 CCDC26Q8TAB7 109 aa21.27■■□□□ 1
GCN1-207ENST00000550471 RUBCNQ92622 972 aa21.27■■□□□ 1
GCN1-207ENST00000550471 USP13Q92995 863 aaPredicted RBP21.27■■□□□ 1
GCN1-207ENST00000550471 PCED1BQ96HM7 432 aa21.27■■□□□ 1
GCN1-207ENST00000550471 XYLT2Q9H1B5 865 aa21.27■■□□□ 1
GCN1-207ENST00000550471 CRTAC1Q9NQ79 661 aa21.27■■□□□ 1
GCN1-207ENST00000550471 GKN1Q9NS71 199 aa21.27■■□□□ 1
GCN1-207ENST00000550471 TRPM5Q9NZQ8 1165 aa21.27■■□□□ 1
GCN1-207ENST00000550471 NCANO14594 1321 aa21.27■□□□□ 0.99
GCN1-207ENST00000550471 COL4A2P08572 1712 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 BDNFP23560 247 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 GPR15P49685 360 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 NDUFA8P51970 172 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 MYL6P60660 151 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 NUCB2P80303 420 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 RUNX3Q13761 415 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 NCOA4Q13772 614 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 KRBA2Q6ZNG9 492 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 INTS8Q75QN2 995 aaKnown RBP21.26■□□□□ 0.99
GCN1-207ENST00000550471 ZNF516Q92618 1163 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 LRRC3BQ96PB8 259 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 TTLL2Q9BWV7 592 aa21.26■□□□□ 0.99
GCN1-207ENST00000550471 NXF1Q9UBU9 619 aaKnown RBP21.26■□□□□ 0.99
GCN1-207ENST00000550471 TICRRQ7Z2Z1 1910 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 PATJQ8NI35 1801 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 LRRIQ3A6PVS8 624 aaPredicted RBP21.25■□□□□ 0.99
GCN1-207ENST00000550471 LILRB5O75023 590 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 ATG13O75143 517 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 RTN3O95197 1032 aaPredicted RBP21.25■□□□□ 0.99
GCN1-207ENST00000550471 C4BPAP04003 597 aaKnown RBP21.25■□□□□ 0.99
GCN1-207ENST00000550471 CKMP06732 381 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 CNR2P34972 360 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 PSMC1P62191 440 aaKnown RBP21.25■□□□□ 0.99
GCN1-207ENST00000550471 GRSF1Q12849 480 aaKnown RBP eCLIP21.25■□□□□ 0.99
GCN1-207ENST00000550471 NR1H3Q13133 447 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 ZACNQ401N2 412 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 MDH1BQ5I0G3 518 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 TDRD10Q5VZ19 366 aaKnown RBP21.25■□□□□ 0.99
GCN1-207ENST00000550471 GUF1Q8N442 669 aaKnown RBP21.25■□□□□ 0.99
GCN1-207ENST00000550471 CPA6Q8N4T0 437 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 B3GALNT2Q8NCR0 500 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 PDZD8Q8NEN9 1154 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 OVCA2Q8WZ82 227 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 FAM84AQ96KN4 292 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 SLITRK1Q96PX8 696 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 MRPL45Q9BRJ2 306 aaKnown RBP21.25■□□□□ 0.99
GCN1-207ENST00000550471 IMPG2Q9BZV3 1241 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 COMMD8Q9NX08 183 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 GTSE1Q9NYZ3 720 aa21.25■□□□□ 0.99
GCN1-207ENST00000550471 FANCMQ8IYD8 2048 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 GOLGA6L4A6NEF3 574 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 ATP2C2O75185 946 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 CLSTN1O94985 981 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 KRT13P13646 458 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 HDCP19113 662 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 HOXA6P31267 233 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 DPYDQ12882 1025 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 SDHAF4Q5VUM1 108 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 SCARA3Q6AZY7 606 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 UNC93AQ86WB7 457 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 ATP2A3Q93084 1043 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 GZF1Q9H116 711 aaPredicted RBP21.24■□□□□ 0.99
GCN1-207ENST00000550471 EPC1Q9H2F5 836 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 RMND1Q9NWS8 449 aa21.24■□□□□ 0.99
GCN1-207ENST00000550471 ARHGAP26Q9UNA1 814 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms