RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 NDUFV1P49821 464 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 CAMK1Q14012 370 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 PTPN14Q15678 1187 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 CTXN3Q4LDR2 81 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 PAN2Q504Q3 1202 aaKnown RBP8.13□□□□□ -1.11
RNF41-208ENST00000550379 FAM109BQ6ICB4 259 aaPredicted RBP8.13□□□□□ -1.11
RNF41-208ENST00000550379 SCARA5Q6ZMJ2 495 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 CLEC20AQ6ZU45 233 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 H2AFVQ71UI9 128 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 TTC30AQ86WT1 665 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 VPS52Q8N1B4 723 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 C12orf29Q8N999 325 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 KLHL23Q8NBE8 558 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 C3orf20Q8ND61 904 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 RFFLQ8WZ73 363 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 IRGQQ8WZA9 623 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 MCRS1Q96EZ8 462 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 MYRFLQ96LU7 910 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 NCAPGQ9BPX3 1015 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 TRIM62Q9BVG3 475 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 TTLL2Q9BWV7 592 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 B3GNT5Q9BYG0 378 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 PBX4Q9BYU1 374 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 DEF6Q9H4E7 631 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 DMAP1Q9NPF5 467 aaPredicted RBP8.13□□□□□ -1.11
RNF41-208ENST00000550379 CNGB3Q9NQW8 809 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 SPTLC3Q9NUV7 552 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 EHD2Q9NZN4 543 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 HCSTQ9UBK5 93 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 DPP7Q9UHL4 492 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 MSRAQ9UJ68 235 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 PPP2R2CQ9Y2T4 447 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 PCDHA13Q9Y5I0 950 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
RNF41-208ENST00000550379 PLXNA4Q9HCM2 1894 aa8.13□□□□□ -1.11
RNF41-208ENST00000550379 LCHNA4D1U4 455 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 SIGLEC16A6NMB1 481 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 NT5C1B-RDH14C9J2C7 533 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 TNFRSF10BO14763 440 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 TRIM66O15016 1216 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 FBXO21O94952 628 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 FTLP02792 175 aaPredicted RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 ERBB2P04626 1255 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 PDGFRBP09619 1106 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 FAM200BP0CF97 657 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 PFKLP17858 780 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 BRD2P25440 801 aaKnown RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 USP8P40818 1118 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 ARHGAP25P42331 645 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 MAGEA1P43355 309 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 NSFP46459 744 aaKnown RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 PPP3CCP48454 512 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 GALCP54803 685 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 GPC5P78333 572 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 ROR1Q01973 937 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 MLLT1Q03111 559 aaPredicted RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 ARID5AQ03989 594 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 GFPT1Q06210 699 aaPredicted RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 GOLGA8FQ08AF8 430 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 GOLGA8DPQ0D2H9 430 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 KIF5AQ12840 1032 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 PDCLQ13371 301 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 KCNC3Q14003 757 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 PSMD5Q16401 504 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 IFI16Q16666 785 aaKnown RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 PPP1R15BQ5SWA1 713 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 CCDC122Q5T0U0 273 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 SNX30Q5VWJ9 437 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 KIAA1841Q6NSI8 718 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 TMEM184AQ6ZMB5 413 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 SLC26A9Q7LBE3 791 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 TAS1R1Q7RTX1 841 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 SLFN11Q7Z7L1 901 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 FAM35AQ86V20 835 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 ERICH1Q86X53 443 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 PALB2Q86YC2 1186 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 REXO1L1PQ8IX06 675 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 CCAR2Q8N163 923 aaKnown RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 ZMIZ2Q8NF64 920 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 SLC2A14Q8TDB8 520 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 SLC20A1Q8WUM9 679 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 OVCA2Q8WZ82 227 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 NT5C3BQ969T7 300 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 ELMO3Q96BJ8 720 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 C18orf8Q96DM3 657 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 TRMT2BQ96GJ1 504 aaKnown RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 CDCA3Q99618 268 aaPredicted RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 DPEP3Q9H4B8 488 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 PLEKHA4Q9H4M7 779 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 MRPL47Q9HD33 250 aaKnown RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 ACP6Q9NPH0 428 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 TLR9Q9NR96 1032 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 ASB3Q9Y575 518 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 PCDHB5Q9Y5E4 795 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 PCDHGC5Q9Y5F6 944 aa8.12□□□□□ -1.11
RNF41-208ENST00000550379 TIMM13Q9Y5L4 95 aaPredicted RBP8.12□□□□□ -1.11
RNF41-208ENST00000550379 ZNF638Q14966 1978 aaKnown RBP8.11□□□□□ -1.11
RNF41-208ENST00000550379 WDR27A2RRH5 827 aa8.11□□□□□ -1.11
RNF41-208ENST00000550379 MTMR11A4FU01 709 aa8.11□□□□□ -1.11
RNF41-208ENST00000550379 C2orf71A6NGG8 1288 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms