RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 ZBTB26Q9HCK0 441 aa6.61□□□□□ -1.35
HCFC2-204ENST00000550335 TMEM8AQ9HCN3 771 aa6.61□□□□□ -1.35
HCFC2-204ENST00000550335 USP15Q9Y4E8 981 aaPredicted RBP6.61□□□□□ -1.35
HCFC2-204ENST00000550335 CDY1Q9Y6F8 540 aa6.61□□□□□ -1.35
HCFC2-204ENST00000550335 ZNF536O15090 1300 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 CCDC195A0A1B0GUA6 201 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 A0A1B0GVC2 190 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 ZSCAN9O15535 394 aaPredicted RBP6.6□□□□□ -1.35
HCFC2-204ENST00000550335 ITGALP20701 1170 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 KLRK1P26718 216 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 LRPAP1P30533 357 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 AARSP49588 968 aaKnown RBP eCLIP6.6□□□□□ -1.35
HCFC2-204ENST00000550335 TOB1P50616 345 aaPredicted RBP6.6□□□□□ -1.35
HCFC2-204ENST00000550335 PAPOLAP51003 745 aaKnown RBP6.6□□□□□ -1.35
HCFC2-204ENST00000550335 NHLH2Q02577 135 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 NSUN2Q08J23 767 aaKnown RBP eCLIP6.6□□□□□ -1.35
HCFC2-204ENST00000550335 SCAPQ12770 1279 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 GPS1Q13098 491 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 SLC12A1Q13621 1099 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 FAM110CQ1W6H9 321 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 PREPLQ4J6C6 727 aaPredicted RBP6.6□□□□□ -1.35
HCFC2-204ENST00000550335 INTS11Q5TA45 600 aaKnown RBP6.6□□□□□ -1.35
HCFC2-204ENST00000550335 TANGO2Q6ICL3 276 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 RETSATQ6NUM9 610 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 RINT1Q6NUQ1 792 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 SYT12Q8IV01 421 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 TMEM151BQ8IW70 566 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 OR52N2Q8NGI0 321 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 TMEM171Q8WVE6 324 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 C3orf49Q96BT1 292 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 LRIG1Q96JA1 1093 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 ZBTB45Q96K62 511 aaPredicted RBP6.6□□□□□ -1.35
HCFC2-204ENST00000550335 COG8Q96MW5 612 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 ZSWIM1Q9BR11 485 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 RTKNQ9BST9 563 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 DNMT3BQ9UBC3 853 aaKnown RBP6.6□□□□□ -1.35
HCFC2-204ENST00000550335 LPAR3Q9UBY5 353 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 FEM1BQ9UK73 627 aa6.6□□□□□ -1.35
HCFC2-204ENST00000550335 DYTNA2CJ06 578 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 TISP43B9A030 160 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 F5H697 171 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 LEFTY2O00292 366 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 NOBOXO60393 691 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 KRT1P04264 644 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 INHBBP09529 407 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 HGFP14210 728 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 JUPP14923 745 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 GCSHP23434 173 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 MAN1A1P33908 653 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 KRT9P35527 623 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 ADD2P35612 726 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 DGKEP52429 567 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 HSD11B2P80365 405 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 DLGAP5Q15398 846 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 SLC5A9Q2M3M2 681 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 BTBD16Q32M84 506 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 P3H1Q32P28 736 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 ARHGAP40Q5TG30 622 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 MANEALQ5VSG8 457 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 TCERG1LQ5VWI1 586 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 DRICH1Q6PGQ1 229 aaPredicted RBP6.59□□□□□ -1.35
HCFC2-204ENST00000550335 LRRTM4Q86VH4 590 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 SGMS1Q86VZ5 419 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 TTC30AQ86WT1 665 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 KRT73Q86Y46 540 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.59□□□□□ -1.35
HCFC2-204ENST00000550335 ZNF384Q8TF68 577 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 NELL2Q99435 816 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 PABPC3Q9H361 631 aaKnown RBP6.59□□□□□ -1.35
HCFC2-204ENST00000550335 FAM83DQ9H4H8 585 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 ELAC1Q9H777 363 aaKnown RBP6.59□□□□□ -1.35
HCFC2-204ENST00000550335 SEC61A2Q9H9S3 476 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 CD320Q9NPF0 282 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 VSX1Q9NZR4 365 aaPredicted RBP6.59□□□□□ -1.35
HCFC2-204ENST00000550335 CAPN11Q9UMQ6 739 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 DTNAQ9Y4J8 743 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 MYO15BQ96JP2 1530 aa6.59□□□□□ -1.35
HCFC2-204ENST00000550335 NACADO15069 1562 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 PNMA6EA0A0J9YXQ4 647 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 J3KTA2 159 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 GPANK1O95872 356 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 VIPP01282 170 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 NTSR1P30989 418 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 PRKAR1BP31321 381 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 TUBP50607 506 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 LOXL3P58215 753 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 RNASE9P60153 205 aaKnown RBP6.58□□□□□ -1.36
HCFC2-204ENST00000550335 MC2RQ01718 297 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 FOXL1Q12952 345 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 MYO1EQ12965 1108 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 FAAH2Q6GMR7 532 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 FAM180BQ6P0A1 224 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 PCGF5Q86SE9 256 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 SLC44A2Q8IWA5 706 aaPredicted RBP6.58□□□□□ -1.36
HCFC2-204ENST00000550335 MDGA1Q8NFP4 955 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 HELLSQ9NRZ9 838 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 IRAK4Q9NWZ3 460 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 HSFX1Q9UBD0 423 aa6.58□□□□□ -1.36
HCFC2-204ENST00000550335 EIF2B4Q9UI10 523 aaKnown RBP6.58□□□□□ -1.36
HCFC2-204ENST00000550335 RB1CC1Q8TDY2 1594 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms