RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 SHC3Q92529 594 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 LENG9Q96B70 501 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 POLR3CQ9BUI4 534 aaPredicted RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 C1orf112Q9NSG2 853 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 WRAP73Q9P2S5 460 aaPredicted RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 HSFX1Q9UBD0 423 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 TCEAL9Q9UHQ7 104 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 XPO7Q9UIA9 1087 aaKnown RBP12.66□□□□□ -0.38
VDR-208ENST00000550325 ARAP2Q8WZ64 1704 aa12.66□□□□□ -0.38
VDR-208ENST00000550325 DCCP43146 1447 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 XPO1O14980 1071 aaKnown RBP12.65□□□□□ -0.38
VDR-208ENST00000550325 CFHP08603 1231 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 AP3B2Q13367 1082 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 SNRNP35Q16560 246 aaKnown RBP12.65□□□□□ -0.38
VDR-208ENST00000550325 TMEM259Q4ZIN3 620 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 FAM102BQ5T8I3 360 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 ZNF577Q9BSK1 485 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 SOX13Q9UN79 622 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 PPIDQ08752 370 aaKnown RBP12.65□□□□□ -0.38
VDR-208ENST00000550325 MPP3Q13368 585 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 EFHC2Q5JST6 749 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 HPS6Q86YV9 775 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 DEFB107AQ8IZN7 70 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 FBXL13Q8NEE6 735 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 FOXP3Q9BZS1 431 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 LRP5O75197 1615 aa12.65□□□□□ -0.38
VDR-208ENST00000550325 H0YIN7 160 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 PEX1O43933 1283 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.39
VDR-208ENST00000550325 KLF1Q13351 362 aaPredicted RBP12.65□□□□□ -0.39
VDR-208ENST00000550325 ANKRD20A4Q4UJ75 823 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 KCNT1Q5JUK3 1230 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 SPOPLQ6IQ16 392 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 TPTE2Q6XPS3 522 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 AGR3Q8TD06 166 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 NCSTNQ92542 709 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 VTI1AQ96AJ9 217 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 ALKBH8Q96BT7 664 aaKnown RBP12.65□□□□□ -0.39
VDR-208ENST00000550325 APOPT1Q96IL0 206 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 MMP19Q99542 508 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 PCDHGA4Q9Y5G9 962 aa12.65□□□□□ -0.39
VDR-208ENST00000550325 TCRBV7S3A2A0A539 114 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 NDC80O14777 642 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 KCNQ2O43526 872 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 GDF11O95390 407 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 STAMBPO95630 424 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 MSLNQ13421 630 aaPredicted RBP12.64□□□□□ -0.39
VDR-208ENST00000550325 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 SPDYAQ5MJ70 313 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 ATG16L1Q676U5 607 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 ANO5Q75V66 913 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 HAUS6Q7Z4H7 955 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 ALLCQ8N6M5 410 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 SEL1LQ9UBV2 794 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 CYP3A7-CYP3A51PA0A087WV96 503 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 E2F8A0AVK6 867 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 AVILO75366 819 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 HLA-DOAP06340 250 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 WEE2P0C1S8 567 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 CYP3A7P24462 503 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 ELK3P41970 407 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 RPL5P46777 297 aaKnown RBP12.64□□□□□ -0.39
VDR-208ENST00000550325 NT5C2P49902 561 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 CCR3P51677 355 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 RHBDL3P58872 404 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 DCTN2Q13561 401 aaKnown RBP12.64□□□□□ -0.39
VDR-208ENST00000550325 PPP6R3Q5H9R7 873 aaPredicted RBP12.64□□□□□ -0.39
VDR-208ENST00000550325 RNASEH2BQ5TBB1 312 aaKnown RBP12.64□□□□□ -0.39
VDR-208ENST00000550325 FBXL19Q6PCT2 694 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 TMEM270Q6UE05 265 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 CDHR3Q6ZTQ4 885 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 PPP1R36Q96LQ0 422 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 TRIM56Q9BRZ2 755 aaKnown RBP12.64□□□□□ -0.39
VDR-208ENST00000550325 TMEM206Q9H813 350 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 CD209Q9NNX6 404 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 ZNF510Q9Y2H8 683 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 PCDHB4Q9Y5E5 795 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 TBX3O15119 743 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 CFLARO15519 480 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 CYP3A4P08684 503 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 TNNI1P19237 187 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 PRELPP51888 382 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 SLC18A1P54219 525 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 GK3PQ14409 553 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 ZNF394Q53GI3 561 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 ADGRD1Q6QNK2 874 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 TRIML2Q8N7C3 387 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 ERLEC1Q96DZ1 483 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 HSD17B14Q9BPX1 270 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 RMI1Q9H9A7 625 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 DDX4Q9NQI0 724 aaKnown RBP12.64□□□□□ -0.39
VDR-208ENST00000550325 PTTG2Q9NZH5 202 aa12.64□□□□□ -0.39
VDR-208ENST00000550325 F8VP50 259 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 PDLIM1O00151 329 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 BUD23O43709 281 aaKnown RBP12.63□□□□□ -0.39
VDR-208ENST00000550325 LYPLA1O75608 230 aaPredicted RBP12.63□□□□□ -0.39
VDR-208ENST00000550325 CCDC166P0CW27 439 aa12.63□□□□□ -0.39
VDR-208ENST00000550325 GDF10P55107 478 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms