RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 ERVFC1P60507 584 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 ERVK-21P61565 698 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 ROR1Q01973 937 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 CENPCQ03188 943 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 BST2Q10589 180 aaKnown RBP8.61□□□□□ -1.03
GPN3-207ENST00000550228 PDCLQ13371 301 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 PTPN14Q15678 1187 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 NFE2Q16621 373 aaPredicted RBP8.61□□□□□ -1.03
GPN3-207ENST00000550228 C2CD6Q53TS8 623 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 CYP4A22Q5TCH4 519 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 RNF19BQ6ZMZ0 732 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 MMS22LQ6ZRQ5 1243 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 PAQR9Q6ZVX9 377 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 H2AFVQ71UI9 128 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 SCN4BQ8IWT1 228 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 WDTC1Q8N5D0 677 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 TTC9BQ8N6N2 239 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 ANKRD52Q8NB46 1076 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 ATAD1Q8NBU5 361 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 SPPL3Q8TCT6 385 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 MICAL1Q8TDZ2 1067 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 IPO4Q8TEX9 1081 aaKnown RBP8.61□□□□□ -1.03
GPN3-207ENST00000550228 GDPD5Q8WTR4 605 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 ZNF653Q96CK0 615 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 SMARCD1Q96GM5 515 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 NOX5Q96PH1 765 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 SEPT5Q99719 369 aaPredicted RBP8.61□□□□□ -1.03
GPN3-207ENST00000550228 TCF25Q9BQ70 676 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 CLSTN3Q9BQT9 956 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 DUSP16Q9BY84 665 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 LHX5Q9H2C1 402 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 SYNCQ9H7C4 482 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 SLC28A3Q9HAS3 691 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 LUC7LQ9NQ29 371 aaKnown RBP8.61□□□□□ -1.03
GPN3-207ENST00000550228 TLR9Q9NR96 1032 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 MYO1AQ9UBC5 1043 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 TJP2Q9UDY2 1190 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 STK39Q9UEW8 545 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 CYTH4Q9UIA0 394 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 LZTS1Q9Y250 596 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 PCDHB5Q9Y5E4 795 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 BACE2Q9Y5Z0 518 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 PLXNA3P51805 1871 aa8.61□□□□□ -1.03
GPN3-207ENST00000550228 MYO16Q9Y6X6 1858 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 PATJQ8NI35 1801 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 WDR27A2RRH5 827 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 RCCD1A6NED2 376 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 USP27XA6NNY8 438 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 C5orf67F2Z3F1 127 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 GOLGA8SH3BPF8 625 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 ZSCAN12O43309 604 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 SOAT2O75908 522 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 BEST1O76090 585 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 LCA5LO95447 670 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 ERBB2P04626 1255 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 SETSIPP0DME0 302 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 GZMAP12544 262 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 LCP1P13796 627 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 NPR3P17342 541 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 CDH5P33151 784 aaPredicted RBP8.6□□□□□ -1.03
GPN3-207ENST00000550228 IRS1P35568 1242 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 GRIK1P39086 918 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 GPD2P43304 727 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 GPR15P49685 360 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 NDUFV1P49821 464 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 SLC8A3P57103 927 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 ADCY1Q08828 1119 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 IFRD2Q12894 506 aaPredicted RBP8.6□□□□□ -1.03
GPN3-207ENST00000550228 GPR17Q13304 367 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 SMC1AQ14683 1233 aaKnown RBP8.6□□□□□ -1.03
GPN3-207ENST00000550228 PTPN20Q4JDL3 420 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 PKDCCQ504Y2 493 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 C10orf76Q5T2E6 689 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 LIN9Q5TKA1 542 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 SDHAF4Q5VUM1 108 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 SLC8B1Q6J4K2 584 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 PMF1Q6P1K2 205 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 LLGL2Q6P1M3 1020 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 CLEC20AQ6ZU45 233 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 MON1BQ7L1V2 547 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 ERICH1Q86X53 443 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 MCOLN2Q8IZK6 566 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 MSANTD4Q8NCY6 345 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 CTNNBL1Q8WYA6 563 aaPredicted RBP8.6□□□□□ -1.03
GPN3-207ENST00000550228 TIFAQ96CG3 184 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 ARHGEF26Q96DR7 871 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 PPP1R13BQ96KQ4 1090 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 CPXM1Q96SM3 734 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 SMOQ99835 787 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 OXCT2Q9BYC2 517 aaPredicted RBP8.6□□□□□ -1.03
GPN3-207ENST00000550228 THAP2Q9H0W7 228 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 ISCUQ9H1K1 167 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 DMAP1Q9NPF5 467 aaPredicted RBP8.6□□□□□ -1.03
GPN3-207ENST00000550228 LZTFL1Q9NQ48 299 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.6□□□□□ -1.03
GPN3-207ENST00000550228 TMEM30AQ9NV96 361 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.6□□□□□ -1.03
GPN3-207ENST00000550228 ADAM22Q9P0K1 906 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 TRIM10Q9UDY6 481 aa8.6□□□□□ -1.03
GPN3-207ENST00000550228 CHORDC1Q9UHD1 332 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms