RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-223ENST00000550188 APOBEC3GQ9HC16 384 aaKnown RBP12.72□□□□□ -0.37
ARFGAP1-223ENST00000550188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.72□□□□□ -0.37
ARFGAP1-223ENST00000550188 RAB20Q9NX57 234 aa12.72□□□□□ -0.37
ARFGAP1-223ENST00000550188 ZMYM5Q9UJ78 669 aa12.72□□□□□ -0.37
ARFGAP1-223ENST00000550188 MAGED2Q9UNF1 606 aaPredicted RBP12.72□□□□□ -0.37
ARFGAP1-223ENST00000550188 GNA14O95837 355 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 PDGFBP01127 241 aaPredicted RBP12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 F11P03951 625 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 DDX6P26196 483 aaKnown RBP eCLIP12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 NDST1P52848 882 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 STX17P56962 302 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 GPC5P78333 572 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 CYP4F8P98187 520 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 PFKPQ01813 784 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 INCA1Q0VD86 236 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 WDR44Q5JSH3 913 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 STXBP5Q5T5C0 1151 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 STKLD1Q8NE28 680 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 SEMA4DQ92854 862 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 C8orf48Q96LL4 319 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 MYRFLQ96LU7 910 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 B3GNT5Q9BYG0 378 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 ZNF518BQ9C0D4 1074 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 DNAI2Q9GZS0 605 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 TASP1Q9H6P5 420 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 ARHGEF3Q9NR81 526 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 EHD2Q9NZN4 543 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 RWDD2AQ9UIY3 292 aa12.71□□□□□ -0.37
ARFGAP1-223ENST00000550188 SYCE3A1L190 88 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 SOBPA7XYQ1 873 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 CLDN5O00501 218 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 PSMC3P17980 439 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 WEE1P30291 646 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 VIPR2P41587 438 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 TYRO3Q06418 890 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 VITQ6UXI7 678 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 TMEM150AQ86TG1 271 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 ACOT1Q86TX2 421 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 FAM35AQ86V20 835 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 ARID3BQ8IVW6 561 aaPredicted RBP12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 CRYBG2Q8N1P7 616 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 FLCNQ8NFG4 579 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 DEPDC1BQ8WUY9 529 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 MRPS31Q92665 395 aaKnown RBP12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 SMARCD1Q96GM5 515 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 MED10Q9BTT4 135 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 TRMT61BQ9BVS5 477 aaKnown RBP12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 NT5C1AQ9BXI3 368 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 PLA2G2FQ9BZM2 168 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 FAM124BQ9H5Z6 455 aaPredicted RBP12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 HMGXB4Q9UGU5 601 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 CA14Q9ULX7 337 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 COQ4Q9Y3A0 265 aa12.7□□□□□ -0.38
ARFGAP1-223ENST00000550188 KRBA1A5PL33 1030 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 HEPACAM2A8MVW5 462 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 F8VP50 259 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 DPYSL4O14531 572 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 LRRN2O75325 713 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 CILPO75339 1184 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 CD58P19256 250 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 RFX1P22670 979 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 FMO5P49326 533 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 MARSP56192 900 aaKnown RBP12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 ORC1Q13415 861 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 GRM2Q14416 872 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 ASTLQ6HA08 431 aaPredicted RBP12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 LRSAM1Q6UWE0 723 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 DENND5BQ6ZUT9 1274 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 MFSD6LQ8IWD5 586 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 YAF2Q8IY57 180 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 CMTM8Q8IZV2 173 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 FUKQ8N0W3 1084 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 TTC39CQ8N584 583 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 DNASE1L2Q92874 299 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 SHDQ96IW2 340 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 TTLL2Q9BWV7 592 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 SRRTQ9BXP5 876 aaKnown RBP12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 DMAP1Q9NPF5 467 aaPredicted RBP12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 KRT82Q9NSB4 513 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 OBP2AQ9NY56 170 aa12.69□□□□□ -0.38
ARFGAP1-223ENST00000550188 NOTCH4Q99466 2003 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 SMTNL1A8MU46 457 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 PMM2O15305 246 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 P4HA2O15460 535 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 TADA3O75528 432 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 PRAMEF12O95522 483 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 CCDC130P13994 396 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 NPR3P17342 541 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 AVPR2P30518 371 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 AVPR1AP37288 418 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 CLCN5P51795 746 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 CACNA2D1P54289 1103 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 VCPP55072 806 aaKnown RBP12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 ZNF445P59923 1031 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 TPM4P67936 248 aa12.68□□□□□ -0.38
ARFGAP1-223ENST00000550188 CETN1Q12798 172 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms