RNA–Protein interactions for RNA: ENST00000549709.5

CNOT2-219, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-219ENST00000549709 BRD3Q15059 726 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 PCBP2Q15366 365 aaKnown RBP eCLIP3.14□□□□□ -1.91
CNOT2-219ENST00000549709 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 PPP4R4Q6NUP7 873 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 ANKRD16Q6P6B7 361 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 PIP4P1Q86T03 277 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 RSPH3Q86UC2 560 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 PNMA8AQ86V59 439 aaPredicted RBP3.14□□□□□ -1.91
CNOT2-219ENST00000549709 TPH2Q8IWU9 490 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 AMOTL1Q8IY63 956 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.14□□□□□ -1.91
CNOT2-219ENST00000549709 SAMD3Q8N6K7 520 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 NSUN6Q8TEA1 469 aaKnown RBP3.14□□□□□ -1.91
CNOT2-219ENST00000549709 KAT5Q92993 513 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 FAM136AQ96C01 138 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 SLC39A13Q96H72 371 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 FAXDC2Q96IV6 333 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 AIFM3Q96NN9 605 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 SMOQ99835 787 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 OBP2AQ9NY56 170 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.14□□□□□ -1.91
CNOT2-219ENST00000549709 SSX2IPQ9Y2D8 614 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 MRFAP1Q9Y605 127 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 COMMD10Q9Y6G5 202 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 ERC2O15083 957 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 GJB1P08034 283 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 SNHG28P0DPA3 235 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 VCAM1P19320 739 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 MALP21145 153 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 CYP2C18P33260 490 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 HTRA4P83105 476 aaPredicted RBP3.13□□□□□ -1.91
CNOT2-219ENST00000549709 OS9Q13438 667 aaPredicted RBP3.13□□□□□ -1.91
CNOT2-219ENST00000549709 GTF2H3Q13889 308 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 GBX1Q14549 363 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 TRIP6Q15654 476 aaKnown RBP3.13□□□□□ -1.91
CNOT2-219ENST00000549709 ATP2B3Q16720 1220 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 LEXMQ3ZCV2 418 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 MINDY4Q4G0A6 757 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 MIDNQ504T8 468 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 CCDC93Q567U6 631 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 PLAC9Q5JTB6 97 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 SYCP2LQ5T4T6 812 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 FCRL6Q6DN72 434 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 PGM2L1Q6PCE3 622 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 KSR2Q6VAB6 950 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 FANCBQ8NB91 859 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 CLPTM1LQ96KA5 538 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 MPHOSPH6Q99547 160 aaKnown RBP3.13□□□□□ -1.91
CNOT2-219ENST00000549709 VRK1Q99986 396 aaPredicted RBP3.13□□□□□ -1.91
CNOT2-219ENST00000549709 FSD1LQ9BXM9 530 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 CHST12Q9NRB3 414 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 DUSP22Q9NRW4 184 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 MKS1Q9NXB0 559 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 SERPINB13Q9UIV8 391 aa3.13□□□□□ -1.91
CNOT2-219ENST00000549709 CCDC154A6NI56 674 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 DCLK1O15075 740 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 XPOTO43592 962 aaKnown RBP3.12□□□□□ -1.91
CNOT2-219ENST00000549709 KIF20AO95235 890 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 IL33O95760 270 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 TRIM27P14373 513 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 NDUFB7P17568 137 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 ATP5F1P24539 256 aaPredicted RBP3.12□□□□□ -1.91
CNOT2-219ENST00000549709 POLGP54098 1239 aaPredicted RBP3.12□□□□□ -1.91
CNOT2-219ENST00000549709 EEFSECP57772 596 aaKnown RBP3.12□□□□□ -1.91
CNOT2-219ENST00000549709 PSMC1P62191 440 aaKnown RBP3.12□□□□□ -1.91
CNOT2-219ENST00000549709 ODF1Q14990 250 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 TRIM71Q2Q1W2 868 aaKnown RBP3.12□□□□□ -1.91
CNOT2-219ENST00000549709 KHDC1Q4VXA5 237 aaKnown RBP3.12□□□□□ -1.91
CNOT2-219ENST00000549709 EFCAB2Q5VUJ9 269 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 EPM2AIP1Q7L775 607 aaPredicted RBP3.12□□□□□ -1.91
CNOT2-219ENST00000549709 SLC29A4Q7RTT9 530 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 FAM90A1Q86YD7 464 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 SVIPQ8NHG7 77 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 CYP2W1Q8TAV3 490 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 COA7Q96BR5 231 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 HSPBAP1Q96EW2 488 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 MARK4Q96L34 752 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 TEKT5Q96M29 485 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 ASB2Q96Q27 587 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 C1orf43Q9BWL3 253 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 NMRK2Q9NPI5 230 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 WDR17Q8IZU2 1322 aa3.12□□□□□ -1.91
CNOT2-219ENST00000549709 IGKV2D-30A0A075B6S6 120 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 TCRBV5S1A1TA0A578 114 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 KLHL33A6NCF5 533 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 LRRC14BA6NHZ5 514 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 ZNF785A8K8V0 405 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 VPS4BO75351 444 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 ZRANB2O95218 330 aaKnown RBP eCLIP3.11□□□□□ -1.91
CNOT2-219ENST00000549709 LDHAP00338 332 aaKnown RBP3.11□□□□□ -1.91
CNOT2-219ENST00000549709 HSPA6P17066 643 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 HOXD9P28356 352 aaPredicted RBP3.11□□□□□ -1.91
CNOT2-219ENST00000549709 CD6P30203 668 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 MMP13P45452 471 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 GCLCP48506 637 aaPredicted RBP3.11□□□□□ -1.91
CNOT2-219ENST00000549709 THBS3P49746 956 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 FXR1P51114 621 aaKnown RBP eCLIP3.11□□□□□ -1.91
CNOT2-219ENST00000549709 CLCN2P51788 898 aa3.11□□□□□ -1.91
CNOT2-219ENST00000549709 ZNF135P52742 658 aaPredicted RBP3.11□□□□□ -1.91
CNOT2-219ENST00000549709 HOXA4Q00056 320 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms