RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 LIG4P49917 911 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 CYP2J2P51589 502 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 NRLP54845 237 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 ZBED6P86452 979 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 ENPEPQ07075 957 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 ADCY1Q08828 1119 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 GRM2Q14416 872 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 NOLC1Q14978 699 aaKnown RBP eCLIP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 AGERQ15109 404 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 SF3A2Q15428 464 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 SYCP1Q15431 976 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 TARBP2Q15633 366 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 ZC2HC1CQ53FD0 456 aaPredicted RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 DCAF17Q5H9S7 520 aaPredicted RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 PSAPL1Q6NUJ1 521 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 LYPD8Q6UX82 237 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 GBP6Q6ZN66 633 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 AGMOQ6ZNB7 445 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 CEP68Q76N32 757 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 BPHLQ86WA6 291 aaPredicted RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 RHPN2Q8IUC4 686 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 MAP4K3Q8IVH8 894 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 TRIM59Q8IWR1 403 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 CELF5Q8N6W0 485 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 GLIS3Q8NEA6 775 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 OR8K1Q8NGG5 319 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 ITFG1Q8TB96 612 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 KIAA1524Q8TCG1 905 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 CPLX3Q8WVH0 158 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 KCNN1Q92952 543 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 CLDN23Q96B33 292 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 FIZ1Q96SL8 496 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 SH2D3AQ9BRG2 576 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 STRA6Q9BX79 667 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 LUC7LQ9NQ29 371 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 CAPN11Q9UMQ6 739 aa7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 ZFP37Q9Y6Q3 630 aaPredicted RBP7.63□□□□□ -1.19
DEPDC4-208ENST00000549341 HELZ2Q9BYK8 2649 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 GTPBP10A4D1E9 387 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 TMEM150BA6NC51 233 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 P4HA2O15460 535 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 TGFB1I1O43294 461 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 XYLBO75191 536 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 ZMYND10O75800 440 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 C8AP07357 584 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 CCDC172P0C7W6 258 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 CASP14P31944 242 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 CYLC1P35663 651 aaPredicted RBP7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 ARL2P36404 184 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 MATR3P43243 847 aaKnown RBP eCLIP7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 SCNN1GP51170 649 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 CCR3P51677 355 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 ADKP55263 362 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 SATB1Q01826 763 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 DSG1Q02413 1049 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 PTSQ03393 145 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 LRMPQ12912 555 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 EXOC3L4Q17RC7 722 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 TMEM132AQ24JP5 1023 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 MIIPQ5JXC2 388 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 PPM1LQ5SGD2 360 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 PRSS55Q6UWB4 352 aaPredicted RBP7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 RSPO2Q6UXX9 243 aaPredicted RBP7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 APBB1IPQ7Z5R6 666 aaPredicted RBP7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 TC2NQ8N9U0 490 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 TMEM161BQ8NDZ6 487 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 SLC7A14Q8TBB6 771 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 ZCCHC14Q8WYQ9 949 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 POMGNT1Q8WZA1 660 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 RABGGTAQ92696 567 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 FOXJ1Q92949 421 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 EEF2KMTQ96G04 330 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 FAM81BQ96LP2 452 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 APOL6Q9BWW8 343 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 FGFBP2Q9BYJ0 223 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 CHRDQ9H2X0 955 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 KCNF1Q9H3M0 494 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 SMOC1Q9H4F8 434 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 RXFP1Q9HBX9 757 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 POLD4Q9HCU8 107 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 GPRC5CQ9NQ84 441 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 KCND1Q9NSA2 647 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 RXFP3Q9NSD7 469 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 DMAC2Q9NW81 257 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 NBEAQ8NFP9 2946 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 KAT6AQ92794 2004 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 WDFY3Q8IZQ1 3526 aa7.62□□□□□ -1.19
DEPDC4-208ENST00000549341 AKAP13Q12802 2813 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 CNTNAP2Q9UHC6 1331 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 LOC400499M0QZD8 3231 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 ZNF233A6NK53 670 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 TTLL8A6PVC2 850 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 HNRNPDLO14979 420 aaKnown RBP7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 AKAP3O75969 853 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 KCNK5O95279 499 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 GYPCP04921 128 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 CCDC175P0C221 793 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 NDUFV2P19404 249 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 GTF2H1P32780 548 aa7.61□□□□□ -1.19
DEPDC4-208ENST00000549341 HOXD13P35453 343 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms