RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 SPATA17Q96L03 361 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 HSFY1Q96LI6 401 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 C8orf48Q96LL4 319 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 TWNKQ96RR1 684 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 AGPAT1Q99943 283 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 DUSP16Q9BY84 665 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 CERS4Q9HA82 394 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 CRTAC1Q9NQ79 661 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 TMEM51Q9NW97 253 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 ZDHHC7Q9NXF8 308 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 ABI2Q9NYB9 513 aaPredicted RBP10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 UXTQ9UBK9 157 aaPredicted RBP10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 FBXW11Q9UKB1 542 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 TSPAN16Q9UKR8 245 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 CHD9Q3L8U1 2897 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 WDR27A2RRH5 827 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 MYBPHLA2RUH7 354 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 RNF225M0QZC1 329 aaPredicted RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 AKR1B10O60218 316 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 XYLBO75191 536 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 AP1G2O75843 785 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 MICAL2O94851 1124 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 LRG1P02750 347 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 CSH1P0DML2 217 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 CSH2P0DML3 217 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 GZMAP12544 262 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 HOXB8P17481 243 aaPredicted RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 DESP17661 470 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 FECHP22830 423 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 IGFBP6P24592 240 aaPredicted RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 BRD2P25440 801 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 DNAJB1P25685 340 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 CDH5P33151 784 aaPredicted RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 GRIK1P39086 918 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 NSFP46459 744 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 PLA2G4AP47712 749 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 PPP3CCP48454 512 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 CLCN4P51793 760 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 ADKP55263 362 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 ADCY1Q08828 1119 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 TAF12Q16514 161 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 GOLGA7BQ2TAP0 167 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 MGAT5BQ3V5L5 792 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 HABP4Q5JVS0 413 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 PPP1R26Q5T8A7 1209 aaPredicted RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 FUKQ8N0W3 1084 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 LEMD2Q8NC56 503 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 KREMEN2Q8NCW0 462 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 ELMO3Q96BJ8 720 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 VCPIP1Q96JH7 1222 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 B3GALT6Q96L58 329 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 BAG1Q99933 345 aaPredicted RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 B3GNT5Q9BYG0 378 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 RHOBTB2Q9BYZ6 727 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 DPEP3Q9H4B8 488 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 FBXO44Q9H4M3 255 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 HAUS4Q9H6D7 363 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 CYP4F11Q9HBI6 524 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 CSNK1G1Q9HCP0 422 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 KRT82Q9NSB4 513 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 FAM49BQ9NUQ9 324 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 SEPT11Q9NVA2 429 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 WDR35Q9P2L0 1181 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 HMGXB4Q9UGU5 601 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 ZMYM5Q9UJ78 669 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 NOCTQ9UK39 431 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 AJAP1Q9UKB5 411 aaPredicted RBP10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 STRIP2Q9ULQ0 834 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 PATJQ8NI35 1801 aa10.33□□□□□ -0.76
SMARCD1-206ENST00000549274 ARHGAP6O43182 974 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 TGM5O43548 720 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 CLASP2O75122 1294 aaKnown RBP10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 ATP2C2O75185 946 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 FBXO21O94952 628 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 MYBL1P10243 752 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 HAPLN1P10915 354 aaPredicted RBP10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 CCDC130P13994 396 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 BDNFP23560 247 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 ADORA2BP29275 332 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 KRT83P78385 493 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 CAMK1Q14012 370 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 SPA17Q15506 151 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 SLC18A3Q16572 532 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 PPM1LQ5SGD2 360 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 LILRA6Q6PI73 481 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 RNF19BQ6ZMZ0 732 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 CCDC186Q7Z3E2 898 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 NOP9Q86U38 636 aaKnown RBP10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 SCML4Q8N228 414 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 ARHGAP18Q8N392 663 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 EFHBQ8N7U6 833 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 C12orf29Q8N999 325 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 C1orf131Q8NDD1 294 aaKnown RBP10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 PDZD8Q8NEN9 1154 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 AUTS2Q8WXX7 1259 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 KCTD13Q8WZ19 329 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 DDX1Q92499 740 aaKnown RBP10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 GOLGA1Q92805 767 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 CALR3Q96L12 384 aaKnown RBP10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 PPP1R9BQ96SB3 815 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms