RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GINM1Q9NU53 330 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 FETUBQ9UGM5 382 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 SYNPO2Q9UMS6 1093 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 UBIAD1Q9Y5Z9 338 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.39□□□□□ -0.11
HDAC7-228ENST00000548938 TCRBV7S3A2A0A539 114 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 TMEM191CA6NGB0 347 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 E5RJQ4 531 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 TMEM63AO94886 807 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 VNN1O95497 513 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 TMEM191BP0C7N4 346 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 PGM1P36871 562 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 CDKN2BP42772 138 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 ETV4P43268 484 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 KRT72Q14CN4 511 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 BBS9Q3SYG4 887 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 ZC3H12AQ5D1E8 599 aaKnown RBP14.39□□□□□ -0.11
HDAC7-228ENST00000548938 TFDP3Q5H9I0 405 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.39□□□□□ -0.11
HDAC7-228ENST00000548938 OXNAD1Q96HP4 312 aaPredicted RBP14.39□□□□□ -0.11
HDAC7-228ENST00000548938 SERAC1Q96JX3 654 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 FAM161BQ96MY7 647 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 ZNF212Q9UDV6 495 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 HERC5Q9UII4 1024 aaKnown RBP14.39□□□□□ -0.11
HDAC7-228ENST00000548938 CCPG1Q9ULG6 757 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 SNCAIPQ9Y6H5 919 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 FAM237BA0A1B0GVD1 139 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 MAGEA13PA6NCF6 341 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 RTN3O95197 1032 aaPredicted RBP14.38□□□□□ -0.11
HDAC7-228ENST00000548938 DHRS4L1P0CG22 281 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 RPS6KA3P51812 740 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 ZRSR2Q15696 482 aaKnown RBP14.38□□□□□ -0.11
HDAC7-228ENST00000548938 PPIL6Q8IXY8 311 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 MTMR14Q8NCE2 650 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 SLC35B2Q8TB61 432 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 ALKBH8Q96BT7 664 aaKnown RBP14.38□□□□□ -0.11
HDAC7-228ENST00000548938 DDX50Q9BQ39 737 aaKnown RBP14.38□□□□□ -0.11
HDAC7-228ENST00000548938 H3BRJ5 948 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 MT-ND3P03897 115 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 SERPINB4P48594 390 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 NBPF20Q3BBV1 942 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 CIAPIN1Q6FI81 312 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 NAT8LQ8N9F0 302 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 JDP2Q8WYK2 163 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 FNBP1Q96RU3 617 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 SGIP1Q9BQI5 828 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 TMEM39BQ9GZU3 492 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 ZCWPW1Q9H0M4 648 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 TCEAL9Q9UHQ7 104 aa14.38□□□□□ -0.11
HDAC7-228ENST00000548938 C4BPAP04003 597 aaKnown RBP14.37□□□□□ -0.11
HDAC7-228ENST00000548938 EIF2AK2P19525 551 aaKnown RBP14.37□□□□□ -0.11
HDAC7-228ENST00000548938 MMP8P22894 467 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 ACOT2P49753 483 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 MDH1BQ5I0G3 518 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 NIPA1Q7RTP0 329 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 TAS1R3Q7RTX0 852 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 CHSY1Q86X52 802 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 PALM2Q8IXS6 379 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 ACTL9Q8TC94 416 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 ZBED3Q96IU2 234 aaPredicted RBP14.37□□□□□ -0.11
HDAC7-228ENST00000548938 GLIS2Q9BZE0 524 aaPredicted RBP14.37□□□□□ -0.11
HDAC7-228ENST00000548938 CHMP2BQ9UQN3 213 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 A0A1B0GVG6 124 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 WNT10BO00744 389 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 TGDSO95455 350 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 GARTP22102 1010 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 NLRP11P59045 1033 aaKnown RBP14.37□□□□□ -0.11
HDAC7-228ENST00000548938 OTUD4Q01804 1114 aaKnown RBP14.37□□□□□ -0.11
HDAC7-228ENST00000548938 PTK7Q13308 1070 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 FKBP1CQ5VVH2 108 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 TREML1Q86YW5 311 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 APOPT1Q96IL0 206 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 ANKEF1Q9NU02 776 aa14.37□□□□□ -0.11
HDAC7-228ENST00000548938 B2RBV5 119 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 ENO1P06733 434 aaKnown RBP14.36□□□□□ -0.11
HDAC7-228ENST00000548938 ZCCHC18P0CG32 403 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 RPL22P35268 128 aaKnown RBP14.36□□□□□ -0.11
HDAC7-228ENST00000548938 LRRC38Q5VT99 294 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 SCARA3Q6AZY7 606 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 DNAJC24Q6P3W2 148 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 DCUN1D2Q6PH85 259 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 PCGF5Q86SE9 256 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 IGDCC3Q8IVU1 814 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 SAMD3Q8N6K7 520 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 CLPTM1LQ96KA5 538 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 HOMER2Q9NSB8 354 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 TBC1D22BQ9NU19 505 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 A8MXQ7 604 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 WDR64B1ANS9 1081 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 E7ESA3 106 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 PYGBP11216 843 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 PTPN7P35236 360 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 NRLP54845 237 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 FAAP100Q0VG06 881 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 PSMD6Q15008 389 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 SMTNL2Q2TAL5 461 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 IZUMO2Q6UXV1 221 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 CLEC4DQ8WXI8 215 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 CEP170P1Q96L14 293 aa14.36□□□□□ -0.11
HDAC7-228ENST00000548938 GBP5Q96PP8 586 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms