RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 GNL2Q13823 731 aaKnown RBP14.56□□□□□ -0.08
CDX2-202ENST00000548877 SV2CQ496J9 727 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 TRIM61Q5EBN2 209 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 ANO7Q6IWH7 933 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 SYT12Q8IV01 421 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 SPATA18Q8TC71 538 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 PIGKQ92643 395 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 FIZ1Q96SL8 496 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 CYP2S1Q96SQ9 504 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 PI4K2AQ9BTU6 479 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 NUSAP1Q9BXS6 441 aaKnown RBP14.56□□□□□ -0.08
CDX2-202ENST00000548877 ARHGAP26Q9UNA1 814 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 MAGED2Q9UNF1 606 aaPredicted RBP14.56□□□□□ -0.08
CDX2-202ENST00000548877 LIMCH1Q9UPQ0 1083 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 ADAMTS20P59510 1910 aa14.56□□□□□ -0.08
CDX2-202ENST00000548877 MYO18AQ92614 2054 aaKnown RBP14.56□□□□□ -0.08
CDX2-202ENST00000548877 CEP192Q8TEP8 1941 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 A0A0A0MRY4 1105 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 NFATC1O95644 943 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 HNRNPLP14866 589 aaKnown RBP eCLIP14.55□□□□□ -0.08
CDX2-202ENST00000548877 PNPLA4P41247 253 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 DHPSP49366 369 aaPredicted RBP14.55□□□□□ -0.08
CDX2-202ENST00000548877 CDR1P51861 262 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 ATP2C1P98194 919 aaPredicted RBP14.55□□□□□ -0.08
CDX2-202ENST00000548877 UAP1L1Q3KQV9 507 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 CFAP221Q4G0U5 840 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 SLFN12LQ6IEE8 588 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 TMEM92Q6UXU6 159 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 LPCAT2Q7L5N7 544 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 EFCAB13Q8IY85 973 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 SH3RF2Q8TEC5 729 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 FNBP1Q96RU3 617 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 REEP2Q9BRK0 252 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 LINC00597Q9H2U6 94 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 ST6GALNAC4Q9H4F1 302 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 PARVGQ9HBI0 331 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 KLK13Q9UKR3 277 aa14.55□□□□□ -0.08
CDX2-202ENST00000548877 TRAK2O60296 914 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 ALDH1A2O94788 518 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 CKMP06732 381 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 ENGP17813 658 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 EIF2DP41214 584 aaKnown RBP14.54□□□□□ -0.08
CDX2-202ENST00000548877 ACOT2P49753 483 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 PDE6CP51160 858 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 DDR2Q16832 855 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 C2orf27AQ580R0 203 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 INTS6LQ5JSJ4 861 aaKnown RBP14.54□□□□□ -0.08
CDX2-202ENST00000548877 SDHAF4Q5VUM1 108 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 CRELD2Q6UXH1 353 aaPredicted RBP14.54□□□□□ -0.08
CDX2-202ENST00000548877 CCDC83Q8IWF9 413 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 TMEM86AQ8N2M4 240 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 PDCL2Q8N4E4 241 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 STKLD1Q8NE28 680 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 LRRC15Q8TF66 581 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 FUBP3Q96I24 572 aaKnown RBP eCLIP14.54□□□□□ -0.08
CDX2-202ENST00000548877 CEP295NLQ96MC4 621 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 ZNF560Q96MR9 790 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 TMEM74BQ9NUR3 256 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 PILRBQ9UKJ0 227 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 PCDH15Q96QU1 1955 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 LAMA5O15230 3695 aa14.54□□□□□ -0.08
CDX2-202ENST00000548877 ANTXRLA6NF34 631 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 ANKRD63C9JTQ0 380 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 K7ENM7 598 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 HDCP19113 662 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 CYP2F1P24903 491 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 MAGEA11P43364 429 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 BYSLQ13895 437 aaKnown RBP14.53□□□□□ -0.08
CDX2-202ENST00000548877 HNRNPDQ14103 355 aaKnown RBP14.53□□□□□ -0.08
CDX2-202ENST00000548877 ZRSR1Q15695 479 aaKnown RBP14.53□□□□□ -0.08
CDX2-202ENST00000548877 MAP7D1Q3KQU3 841 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 ARL6IP4Q66PJ3 421 aaKnown RBP14.53□□□□□ -0.08
CDX2-202ENST00000548877 LMBRD2Q68DH5 695 aaPredicted RBP14.53□□□□□ -0.08
CDX2-202ENST00000548877 ADALQ6DHV7 355 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 KIAA1211LQ6NV74 962 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 PROSER1Q86XN7 944 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 MYCT1Q8N699 235 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 ARL14EPQ8N8R7 260 aaPredicted RBP14.53□□□□□ -0.08
CDX2-202ENST00000548877 FSIP1Q8NA03 581 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 WHAMMQ8TF30 809 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 SPACA7Q96KW9 195 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 TRPC7Q9HCX4 862 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 MBD1Q9UIS9 605 aaPredicted RBP14.53□□□□□ -0.08
CDX2-202ENST00000548877 AGO2Q9UKV8 859 aaKnown RBP14.53□□□□□ -0.08
CDX2-202ENST00000548877 L1RE1Q9UN81 338 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 LOC400499M0QZD8 3231 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 ADAMTS9Q9P2N4 1935 aa14.53□□□□□ -0.08
CDX2-202ENST00000548877 SPAARA0A1B0GVQ0 90 aa14.52□□□□□ -0.09
CDX2-202ENST00000548877 C2orf78A6NCI8 922 aa14.52□□□□□ -0.09
CDX2-202ENST00000548877 GABRDO14764 452 aa14.52□□□□□ -0.09
CDX2-202ENST00000548877 IL18RAPO95256 599 aa14.52□□□□□ -0.09
CDX2-202ENST00000548877 RDXP35241 583 aaKnown RBP14.52□□□□□ -0.09
CDX2-202ENST00000548877 PTGER3P43115 390 aa14.52□□□□□ -0.09
CDX2-202ENST00000548877 KIR2DL1P43626 348 aaPredicted RBP14.52□□□□□ -0.09
CDX2-202ENST00000548877 SIM1P81133 766 aaPredicted RBP14.52□□□□□ -0.09
CDX2-202ENST00000548877 ZXDBP98169 803 aa14.52□□□□□ -0.09
CDX2-202ENST00000548877 ZC2HC1CQ53FD0 456 aaPredicted RBP14.52□□□□□ -0.09
CDX2-202ENST00000548877 FAM171BQ6P995 826 aa14.52□□□□□ -0.09
CDX2-202ENST00000548877 RAB44Q7Z6P3 723 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms