RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 KLF9Q13886 244 aaPredicted RBP5.09□□□□□ -1.59
CCDC38-206ENST00000548771 YTHDF3Q7Z739 585 aaKnown RBP5.09□□□□□ -1.59
CCDC38-206ENST00000548771 GAS2L3Q86XJ1 694 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 ZNF366Q8N895 744 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 C8orf58Q8NAV2 365 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 RPL36ALQ969Q0 106 aaKnown RBP5.09□□□□□ -1.59
CCDC38-206ENST00000548771 LENG8Q96PV6 779 aaPredicted RBP5.09□□□□□ -1.59
CCDC38-206ENST00000548771 TRIM54Q9BYV2 358 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 BHMT2Q9H2M3 363 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 CXorf36Q9H7Y0 433 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 GLOD4Q9HC38 313 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 TYW1Q9NV66 732 aaKnown RBP5.09□□□□□ -1.59
CCDC38-206ENST00000548771 PNMA8BQ9ULN7 279 aaPredicted RBP5.09□□□□□ -1.59
CCDC38-206ENST00000548771 SHOC2Q9UQ13 582 aa5.09□□□□□ -1.59
CCDC38-206ENST00000548771 MRPS17Q9Y2R5 130 aaKnown RBP5.09□□□□□ -1.59
CCDC38-206ENST00000548771 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.09□□□□□ -1.59
CCDC38-206ENST00000548771 A0A087WWL8 130 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 H7C1Q1 480 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 OFD1O75665 1012 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 CYP2D6P10635 497 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 CTGFP29279 349 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 KCNJ5P48544 419 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 DGKEP52429 567 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 FGL2Q14314 439 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 DAZAP2Q15038 168 aaPredicted RBP5.08□□□□□ -1.6
CCDC38-206ENST00000548771 SUPT20HL1Q3ZLR7 823 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 CCDC157Q569K6 752 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 SLC18B1Q6NT16 456 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 MTHFD1LQ6UB35 978 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 GRAMD1CQ8IYS0 662 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 ZNF48Q96MX3 618 aaPredicted RBP5.08□□□□□ -1.6
CCDC38-206ENST00000548771 AIFM3Q96NN9 605 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 ARMT1Q9H993 441 aa5.08□□□□□ -1.6
CCDC38-206ENST00000548771 PIH1D1Q9NWS0 290 aaKnown RBP5.08□□□□□ -1.6
CCDC38-206ENST00000548771 ALDH1L1O75891 902 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 UBXN7O94888 489 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 NPR1P16066 1061 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 ABRAQ8N0Z2 381 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 GALNT16Q8N428 558 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 LRRC71Q8N4P6 559 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 CYP2W1Q8TAV3 490 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 SLC35G2Q8TBE7 412 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 KBTBD7Q8WVZ9 684 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 R3HDM4Q96D70 268 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 MTFMTQ96DP5 389 aaKnown RBP5.07□□□□□ -1.6
CCDC38-206ENST00000548771 RITA1Q96K30 269 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 ZC3H10Q96K80 434 aaKnown RBP5.07□□□□□ -1.6
CCDC38-206ENST00000548771 PUS7Q96PZ0 661 aaKnown RBP5.07□□□□□ -1.6
CCDC38-206ENST00000548771 CAMKK2Q96RR4 588 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 P2RX7Q99572 595 aaKnown RBP5.07□□□□□ -1.6
CCDC38-206ENST00000548771 SH2D3AQ9BRG2 576 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 KRTAP1-5Q9BYS1 174 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 SMURF2Q9HAU4 748 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 AASDHPPTQ9NRN7 309 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 TMX2Q9Y320 296 aa5.07□□□□□ -1.6
CCDC38-206ENST00000548771 TTC3P53804 2025 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 CYP2D7A0A087X1C5 515 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 SMIM22K7EJ46 135 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 KCNAB3O43448 404 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 AP1G1O43747 822 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 TOP3BO95985 862 aaKnown RBP5.06□□□□□ -1.6
CCDC38-206ENST00000548771 NPSP0C0P6 89 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 NCLP19338 710 aaKnown RBP5.06□□□□□ -1.6
CCDC38-206ENST00000548771 KCNA3P22001 575 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 PDE6CP51160 858 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 AGFG1P52594 562 aaKnown RBP5.06□□□□□ -1.6
CCDC38-206ENST00000548771 PDE1AP54750 535 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 MAPK7Q13164 816 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 TTF1Q15361 905 aaPredicted RBP5.06□□□□□ -1.6
CCDC38-206ENST00000548771 ETFDHQ16134 617 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 CYP1B1Q16678 543 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 TBC1D25Q3MII6 688 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 IFIT1BQ5T764 474 aaKnown RBP5.06□□□□□ -1.6
CCDC38-206ENST00000548771 NAPRTQ6XQN6 538 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 TRIM72Q6ZMU5 477 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 DENND1CQ8IV53 801 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 RSPRY1Q96DX4 576 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 NT5C1BQ96P26 610 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 ASB2Q96Q27 587 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 RTFDC1Q9BY42 306 aaPredicted RBP5.06□□□□□ -1.6
CCDC38-206ENST00000548771 PRSS22Q9GZN4 317 aa5.06□□□□□ -1.6
CCDC38-206ENST00000548771 SMIM35A0A1B0GVV1 85 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 TCRBV5S1A1TA0A578 114 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 AKAP10O43572 662 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 XRCC6P12956 609 aaKnown RBP eCLIP5.05□□□□□ -1.6
CCDC38-206ENST00000548771 HTR1BP28222 390 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 ADORA2AP29274 412 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 PTGER1P34995 402 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 CTBP1Q13363 440 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 PIN1Q13526 163 aaPredicted RBP5.05□□□□□ -1.6
CCDC38-206ENST00000548771 LY6KQ17RY6 165 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 RNASE12Q5GAN4 147 aaKnown RBP5.05□□□□□ -1.6
CCDC38-206ENST00000548771 FCRL6Q6DN72 434 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 KIRREL2Q6UWL6 708 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 DNAJC5GQ8N7S2 189 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 ABHD11Q8NFV4 315 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 XAGE5Q8WWM1 108 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 SNX18Q96RF0 628 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 TAAR9Q96RI9 348 aa5.05□□□□□ -1.6
CCDC38-206ENST00000548771 ACO2Q99798 780 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms