RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SNX9Q9Y5X1 595 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 CLIC4Q9Y696 253 aa17.67■□□□□ 0.42
SSH1-208ENST00000548522 TRAV19A0A0A6YYK7 116 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 GIPC1O14908 333 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 GCNT3O95395 438 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 BMP15O95972 392 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 KRT19P08727 400 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 IFNAR2P48551 515 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 SHC2P98077 582 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 LARP1BQ659C4 914 aaKnown RBP17.66■□□□□ 0.42
SSH1-208ENST00000548522 CSGALNACT2Q8N6G5 542 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 NOC3LQ8WTT2 800 aaKnown RBP17.66■□□□□ 0.42
SSH1-208ENST00000548522 ATP2A3Q93084 1043 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 CLIC6Q96NY7 704 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 TPSD1Q9BZJ3 242 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 PDE11AQ9HCR9 933 aa17.66■□□□□ 0.42
SSH1-208ENST00000548522 UXTQ9UBK9 157 aaPredicted RBP17.66■□□□□ 0.42
SSH1-208ENST00000548522 FBXO2Q9UK22 296 aaPredicted RBP17.66■□□□□ 0.42
SSH1-208ENST00000548522 LNP1A1A4G5 178 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 SOBPA7XYQ1 873 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 GABRDO14764 452 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 SCAMP3O14828 347 aaKnown RBP17.65■□□□□ 0.42
SSH1-208ENST00000548522 USP17L7P0C7H9 530 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 SEC13P55735 322 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 USP46P62068 366 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 AMPD2Q01433 879 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 MYL7Q01449 175 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 POSTNQ15063 836 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 ELF2Q15723 593 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 SOWAHAQ2M3V2 549 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 GAB4Q2WGN9 574 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 CFAP221Q4G0U5 840 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 FBXO43Q4G163 708 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 BRAPQ7Z569 592 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 SPATA2LQ8IUW3 424 aaPredicted RBP17.65■□□□□ 0.42
SSH1-208ENST00000548522 SFTPA1Q8IWL2 248 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 TMEM86AQ8N2M4 240 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 LRRC52Q8N7C0 313 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 KBTBD7Q8WVZ9 684 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 MYLPFQ96A32 169 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 ACCSQ96QU6 501 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 PCIF1Q9H4Z3 704 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 TMEM206Q9H813 350 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 GDAP2Q9NXN4 497 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 ITGA11Q9UKX5 1188 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 KIAA1549LQ6ZVL6 1849 aa17.65■□□□□ 0.42
SSH1-208ENST00000548522 BCLAF3A2AJT9 711 aaKnown RBP17.64■□□□□ 0.41
SSH1-208ENST00000548522 C4orf47A7E2U8 309 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 CAVIN2O95810 425 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 BCKDHBP21953 392 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 LMO2P25791 158 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 GBP1P32455 592 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 OPRD1P41143 372 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 DGKEP52429 567 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 MESP2Q0VG99 397 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 ANO7Q6IWH7 933 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 FAM173BQ6P4H8 233 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 GLIS3Q8NEA6 775 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 TSTD1Q8NFU3 115 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 OR5B17Q8NGF7 314 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 ACDQ96AP0 544 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 CRTAC1Q9NQ79 661 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 SEL1LQ9UBV2 794 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 STK17AQ9UEE5 414 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 EBF1Q9UH73 591 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 MYO16Q9Y6X6 1858 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 CACNA1GO43497 2377 aa17.64■□□□□ 0.41
SSH1-208ENST00000548522 A0A087X0B3 334 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 VPS37CA5D8V6 355 aaPredicted RBP17.63■□□□□ 0.41
SSH1-208ENST00000548522 PATE3B3GLJ2 98 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 K7EQS6 105 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 HNRNPLP14866 589 aaKnown RBP eCLIP17.63■□□□□ 0.41
SSH1-208ENST00000548522 NOVA1P51513 510 aaKnown RBP17.63■□□□□ 0.41
SSH1-208ENST00000548522 KCNB1Q14721 858 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 C2orf27AQ580R0 203 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 FAM171BQ6P995 826 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 TOP6BLQ8N6T0 577 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 USP33Q8TEY7 942 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 SYT15Q9BQS2 421 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 ARHGAP26Q9UNA1 814 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 EXOC7Q9UPT5 735 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 NME7Q9Y5B8 376 aa17.63■□□□□ 0.41
SSH1-208ENST00000548522 ZNF638Q14966 1978 aaKnown RBP17.62■□□□□ 0.41
SSH1-208ENST00000548522 ZFYVE26Q68DK2 2539 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 RHOBTB1O94844 696 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 PRPF6O94906 941 aaKnown RBP17.62■□□□□ 0.41
SSH1-208ENST00000548522 TMEM191BP0C7N4 346 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 IDEP14735 1019 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 GAP43P17677 238 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 HDCP19113 662 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 SPINK2P20155 84 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 GARTP22102 1010 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 BDNFP23560 247 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 PCSK1P29120 753 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 RBP5P82980 135 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 RRAGBQ5VZM2 374 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 PMS2CLQ68D20 193 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 SYCP3Q8IZU3 236 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 CCDC33Q8N5R6 958 aa17.62■□□□□ 0.41
SSH1-208ENST00000548522 MDGA1Q8NFP4 955 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms