RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 ALG13Q9NP73 1137 aaKnown RBP30.43■■■□□ 2.46
BRF1-213ENST00000548421 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP30.43■■■□□ 2.46
BRF1-213ENST00000548421 CYTH4Q9UIA0 394 aa30.43■■■□□ 2.46
BRF1-213ENST00000548421 ANKRD62A6NC57 917 aa30.42■■■□□ 2.46
BRF1-213ENST00000548421 AP1G2O75843 785 aa30.42■■■□□ 2.46
BRF1-213ENST00000548421 DNAJB2P25686 324 aa30.42■■■□□ 2.46
BRF1-213ENST00000548421 CDR1P51861 262 aa30.42■■■□□ 2.46
BRF1-213ENST00000548421 ARPP19P56211 112 aa30.42■■■□□ 2.46
BRF1-213ENST00000548421 GPR17Q13304 367 aa30.42■■■□□ 2.46
BRF1-213ENST00000548421 PDCLQ13371 301 aa30.42■■■□□ 2.46
BRF1-213ENST00000548421 MON1BQ7L1V2 547 aa30.42■■■□□ 2.46
BRF1-213ENST00000548421 MSANTD4Q8NCY6 345 aa30.42■■■□□ 2.46
BRF1-213ENST00000548421 SLC35F5Q8WV83 523 aa30.42■■■□□ 2.46
BRF1-213ENST00000548421 FUBP3Q96I24 572 aaKnown RBP eCLIP30.42■■■□□ 2.46
BRF1-213ENST00000548421 RPL17P18621 184 aaKnown RBP30.41■■■□□ 2.46
BRF1-213ENST00000548421 MMP8P22894 467 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 PTPN14Q15678 1187 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 CFAP221Q4G0U5 840 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 CLEC20AQ6ZU45 233 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 ERICH1Q86X53 443 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 SPPL3Q8TCT6 385 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 CTNNBL1Q8WYA6 563 aaPredicted RBP30.41■■■□□ 2.46
BRF1-213ENST00000548421 TRIM11Q96F44 468 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 VCPIP1Q96JH7 1222 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 CLSTN3Q9BQT9 956 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 NKX2-4Q9H2Z4 354 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 TRMT1Q9NXH9 659 aaKnown RBP30.41■■■□□ 2.46
BRF1-213ENST00000548421 ADAM22Q9P0K1 906 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 PCDHB5Q9Y5E4 795 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 CHD7Q9P2D1 2997 aa30.41■■■□□ 2.46
BRF1-213ENST00000548421 RCCD1A6NED2 376 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 XPO1O14980 1071 aaKnown RBP30.4■■■□□ 2.46
BRF1-213ENST00000548421 PJA2O43164 708 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 ABCB4P21439 1286 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 BDNFP23560 247 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 MSNP26038 577 aaKnown RBP30.4■■■□□ 2.46
BRF1-213ENST00000548421 OR1D2P34982 312 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 ROR1Q01973 937 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 C1QBPQ07021 282 aaKnown RBP30.4■■■□□ 2.46
BRF1-213ENST00000548421 KIF5AQ12840 1032 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 CHRDL2Q6WN34 429 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 ZNF662Q6ZS27 426 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 TMC7Q7Z402 723 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 MCOLN2Q8IZK6 566 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 STK32AQ8WU08 396 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 C2orf15Q8WU43 125 aaKnown RBP30.4■■■□□ 2.46
BRF1-213ENST00000548421 POF1BQ8WVV4 589 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 AUTS2Q8WXX7 1259 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 C11orf70Q9BRQ4 267 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 PRO3102Q9H379 93 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 ABI2Q9NYB9 513 aaPredicted RBP30.4■■■□□ 2.46
BRF1-213ENST00000548421 FNIP2Q9P278 1114 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 TFR2Q9UP52 801 aa30.4■■■□□ 2.46
BRF1-213ENST00000548421 A0A0U1RQJ8 604 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 ADAM12O43184 909 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 LILRB3O75022 631 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 CALB1P05937 261 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 TMEM253P0C7T8 217 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 PLA2G4AP47712 749 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 PTPN20Q4JDL3 420 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 PPP2R2DQ66LE6 453 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 MMS22LQ6ZRQ5 1243 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 REXO1L1PQ8IX06 675 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 C17orf53Q8N3J3 647 aaPredicted RBP30.39■■■□□ 2.46
BRF1-213ENST00000548421 ATRIPQ8WXE1 791 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 PPP1R13BQ96KQ4 1090 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 PGLYRP2Q96PD5 576 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 TCF25Q9BQ70 676 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 RHOBTB2Q9BYZ6 727 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 TSGA10Q9BZW7 698 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 LACRTQ9GZZ8 138 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 THAP2Q9H0W7 228 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 RXFP1Q9HBX9 757 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 ABCB6Q9NP58 842 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 PATJQ8NI35 1801 aa30.39■■■□□ 2.46
BRF1-213ENST00000548421 MTMR11A4FU01 709 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 USP27XA6NNY8 438 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 TULP2O00295 520 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 MYBL1P10243 752 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 MAP3K7CLP57077 242 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 PMF1Q6P1K2 205 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 SPPL2BQ8TCT7 592 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 IPO4Q8TEX9 1081 aaKnown RBP30.38■■■□□ 2.45
BRF1-213ENST00000548421 CPXM1Q96SM3 734 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 SMOQ99835 787 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 CSNK1G1Q9HCP0 422 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 ENTPD7Q9NQZ7 604 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 TLR9Q9NR96 1032 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 ST7Q9NRC1 585 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 WDR27A2RRH5 827 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 GOLGA6L9A6NEM1 432 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 BEST1O76090 585 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 CA8P35219 290 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 CACNA2D1P54289 1103 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 GPC5P78333 572 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 PTP4A2Q12974 167 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 ARHGAP29Q52LW3 1261 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 RNF19BQ6ZMZ0 732 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 ZNF653Q96CK0 615 aa30.38■■■□□ 2.45
BRF1-213ENST00000548421 SLC4A5Q9BY07 1137 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms