RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 GCNT4Q9P109 453 aa15.71■□□□□ 0.11
C12orf49-204ENST00000548356 ODF2LQ9ULJ1 636 aa15.71■□□□□ 0.11
C12orf49-204ENST00000548356 ARHGAP26Q9UNA1 814 aa15.71■□□□□ 0.11
C12orf49-204ENST00000548356 GPSM3Q9Y4H4 160 aa15.71■□□□□ 0.11
C12orf49-204ENST00000548356 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 NPHP3-ACAD11A0A0J9YXS1 232 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 PLA2G4BP0C869 781 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 HNRNPLP14866 589 aaKnown RBP eCLIP15.7■□□□□ 0.1
C12orf49-204ENST00000548356 POU5F1Q01860 360 aaKnown RBP15.7■□□□□ 0.1
C12orf49-204ENST00000548356 BYSLQ13895 437 aaKnown RBP15.7■□□□□ 0.1
C12orf49-204ENST00000548356 HNRNPDQ14103 355 aaKnown RBP15.7■□□□□ 0.1
C12orf49-204ENST00000548356 ZNF423Q2M1K9 1284 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 ARSHQ5FYA8 562 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 LYSMD4Q5XG99 296 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 SLC39A4Q6P5W5 647 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 ARMCX6Q7L4S7 300 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 TTC30AQ86WT1 665 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 TMEFF1Q8IYR6 380 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 HDDC3Q8N4P3 179 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 FSIP1Q8NA03 581 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 CEP76Q8TAP6 659 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 RLN3Q8WXF3 142 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 ACBD6Q9BR61 282 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 LLPHQ9BRT6 129 aaKnown RBP15.7■□□□□ 0.1
C12orf49-204ENST00000548356 MBD1Q9UIS9 605 aaPredicted RBP15.7■□□□□ 0.1
C12orf49-204ENST00000548356 PILRBQ9UKJ0 227 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 LOC400499M0QZD8 3231 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 PTPRDP23468 1912 aa15.7■□□□□ 0.1
C12orf49-204ENST00000548356 GCN1Q92616 2671 aaKnown RBP15.7■□□□□ 0.1
C12orf49-204ENST00000548356 TNRC6BQ9UPQ9 1833 aaKnown RBP15.69■□□□□ 0.1
C12orf49-204ENST00000548356 K7ENM7 598 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 CYP2F1P24903 491 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 PDE6CP51160 858 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 NEK4P51957 841 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 ATXN3P54252 364 aaPredicted RBP15.69■□□□□ 0.1
C12orf49-204ENST00000548356 KCNB1Q14721 858 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 GAB4Q2WGN9 574 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 MAP7D1Q3KQU3 841 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 SOWAHCQ53LP3 525 aaPredicted RBP15.69■□□□□ 0.1
C12orf49-204ENST00000548356 RAB44Q7Z6P3 723 aaPredicted RBP15.69■□□□□ 0.1
C12orf49-204ENST00000548356 CHCHD4Q8N4Q1 142 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 KIAA1958Q8N8K9 716 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 ARL14EPQ8N8R7 260 aaPredicted RBP15.69■□□□□ 0.1
C12orf49-204ENST00000548356 ZNF560Q96MR9 790 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 POLMQ9NP87 494 aaPredicted RBP15.69■□□□□ 0.1
C12orf49-204ENST00000548356 SLC6A14Q9UN76 642 aa15.69■□□□□ 0.1
C12orf49-204ENST00000548356 C2orf78A6NCI8 922 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 ANTXRLA6NF34 631 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 OPHN1O60890 802 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 CHRM1P11229 460 aaPredicted RBP15.68■□□□□ 0.1
C12orf49-204ENST00000548356 PFKLP17858 780 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 HDCP19113 662 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 ABCD1P33897 745 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 PNPLA4P41247 253 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 ACOT2P49753 483 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 DUOXA1Q1HG43 343 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 CFAP221Q4G0U5 840 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 ZC2HC1CQ53FD0 456 aaPredicted RBP15.68■□□□□ 0.1
C12orf49-204ENST00000548356 INTS6LQ5JSJ4 861 aaKnown RBP15.68■□□□□ 0.1
C12orf49-204ENST00000548356 NT5DC4Q86YG4 428 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 PDCL2Q8N4E4 241 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 ALLCQ8N6M5 410 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 FRMD1Q8N878 549 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 IL17RCQ8NAC3 791 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 TXNDC5Q8NBS9 432 aaKnown RBP15.68■□□□□ 0.1
C12orf49-204ENST00000548356 LRRC15Q8TF66 581 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 PKMYT1Q99640 499 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 REEP2Q9BRK0 252 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.68■□□□□ 0.1
C12orf49-204ENST00000548356 CIZ1Q9ULV3 898 aaPredicted RBP15.68■□□□□ 0.1
C12orf49-204ENST00000548356 ADAMTS20P59510 1910 aa15.68■□□□□ 0.1
C12orf49-204ENST00000548356 IGSF10Q6WRI0 2623 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 PI4KAP42356 2102 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 TCHHQ07283 1943 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 MYMKA6NI61 221 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 SGK1O00141 431 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 KLF8O95600 359 aaPredicted RBP15.67■□□□□ 0.1
C12orf49-204ENST00000548356 CFIP05156 583 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 SERPINF2P08697 491 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 ITPKAP23677 461 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 EIF2DP41214 584 aaKnown RBP15.67■□□□□ 0.1
C12orf49-204ENST00000548356 ZNF131P52739 623 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 FAM193AP78312 1265 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 HMGN5P82970 282 aaKnown RBP15.67■□□□□ 0.1
C12orf49-204ENST00000548356 GTF2BQ00403 316 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 GFPT1Q06210 699 aaPredicted RBP15.67■□□□□ 0.1
C12orf49-204ENST00000548356 TMEM119Q4V9L6 283 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 EOGTQ5NDL2 527 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 ADALQ6DHV7 355 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 SLFN12LQ6IEE8 588 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 RABEPKQ7Z6M1 372 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 PDZD3Q86UT5 571 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 TMEM86AQ8N2M4 240 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 MYCT1Q8N699 235 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 SPATA18Q8TC71 538 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 FUBP3Q96I24 572 aaKnown RBP eCLIP15.67■□□□□ 0.12e-7■■■■■ 29.3
C12orf49-204ENST00000548356 CDK5RAP3Q96JB5 506 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 PLIN2Q99541 437 aa15.67■□□□□ 0.1
C12orf49-204ENST00000548356 GTPBP2Q9BX10 602 aaKnown RBP15.67■□□□□ 0.1
C12orf49-204ENST00000548356 PARVGQ9HBI0 331 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms