RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 SLC4A5Q9BY07 1137 aa13.05□□□□□ -0.32
RAB5B-204ENST00000548068 DUSP16Q9BY84 665 aa13.05□□□□□ -0.32
RAB5B-204ENST00000548068 NRDE2Q9H7Z3 1164 aa13.05□□□□□ -0.32
RAB5B-204ENST00000548068 PRKAG2Q9UGJ0 569 aa13.05□□□□□ -0.32
RAB5B-204ENST00000548068 CHORDC1Q9UHD1 332 aaPredicted RBP13.05□□□□□ -0.32
RAB5B-204ENST00000548068 ADAM28Q9UKQ2 775 aa13.05□□□□□ -0.32
RAB5B-204ENST00000548068 FAN1Q9Y2M0 1017 aa13.05□□□□□ -0.32
RAB5B-204ENST00000548068 SF3B1O75533 1304 aaKnown RBP eCLIP13.05□□□□□ -0.323e-9■■■■■ 93.6
RAB5B-204ENST00000548068 E5RJQ4 531 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 PGRMC1O00264 195 aaKnown RBP13.04□□□□□ -0.32
RAB5B-204ENST00000548068 DYNC1I1O14576 645 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 DDX3YO15523 660 aaKnown RBP13.04□□□□□ -0.32
RAB5B-204ENST00000548068 PSTPIP1O43586 416 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 HCRTO43612 131 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 NPR3P17342 541 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 ACAT1P24752 427 aaKnown RBP13.04□□□□□ -0.32
RAB5B-204ENST00000548068 DNA2P51530 1060 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 ACAP1Q15027 740 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 FAM102AQ5T9C2 384 aaPredicted RBP13.04□□□□□ -0.32
RAB5B-204ENST00000548068 SEL1L2Q5TEA6 688 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 OR6B2Q6IFH4 312 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 CCDC70Q6NSX1 233 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 C4orf50Q6ZRC1 276 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 PHLDB2Q86SQ0 1253 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 TMEM110Q86TL2 294 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 FAM35AQ86V20 835 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 CREG2Q8IUH2 290 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 FUKQ8N0W3 1084 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 NIPA2Q8N8Q9 360 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 ACTRT1Q8TDG2 376 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 COG1Q8WTW3 980 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 CD101Q93033 1021 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 SMARCD1Q96GM5 515 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 PSMB7Q99436 277 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 OXCT2Q9BYC2 517 aaPredicted RBP13.04□□□□□ -0.32
RAB5B-204ENST00000548068 CRTAC1Q9NQ79 661 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 DNAJB4Q9UDY4 337 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 PRG3Q9Y2Y8 225 aaPredicted RBP13.04□□□□□ -0.32
RAB5B-204ENST00000548068 PCDHA3Q9Y5H8 950 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 TIMM13Q9Y5L4 95 aaPredicted RBP13.04□□□□□ -0.32
RAB5B-204ENST00000548068 CEP350Q5VT06 3117 aa13.04□□□□□ -0.32
RAB5B-204ENST00000548068 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
RAB5B-204ENST00000548068 TRIM43BA6NCK2 446 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 I3L4J1 428 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 NRP1O14786 923 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 ZNF185O15231 689 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 CEP104O60308 925 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 B4GALT3O60512 393 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 ATP2C2O75185 946 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 CXCR5P32302 372 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 RPL34P49207 117 aaKnown RBP13.03□□□□□ -0.32
RAB5B-204ENST00000548068 RWDD2BP57060 319 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 PPIGQ13427 754 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAB5B-204ENST00000548068 PMF1Q6P1K2 205 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 LLGL2Q6P1M3 1020 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 FAM183BPQ6ZVS7 135 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 RHOT1Q8IXI2 618 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 DCP1BQ8IZD4 617 aaKnown RBP13.03□□□□□ -0.32
RAB5B-204ENST00000548068 RASGEF1CQ8N431 466 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 KCTD13Q8WZ19 329 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 TRIM43Q96BQ3 446 aaPredicted RBP13.03□□□□□ -0.32
RAB5B-204ENST00000548068 BTBD6Q96KE9 485 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 B3GNT5Q9BYG0 378 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 UBXN6Q9BZV1 441 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 METTL5Q9NRN9 209 aaKnown RBP13.03□□□□□ -0.32
RAB5B-204ENST00000548068 KRT82Q9NSB4 513 aa13.03□□□□□ -0.32
RAB5B-204ENST00000548068 TTC7AQ9ULT0 858 aaPredicted RBP13.03□□□□□ -0.32
RAB5B-204ENST00000548068 PATJQ8NI35 1801 aa13.02□□□□□ -0.32
RAB5B-204ENST00000548068 PTPRDP23468 1912 aa13.02□□□□□ -0.32
RAB5B-204ENST00000548068 OR6C75A6NL08 312 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 H7C4K7 107 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 SART1O43290 800 aaKnown RBP13.02□□□□□ -0.33
RAB5B-204ENST00000548068 AP1G2O75843 785 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 DGKIO75912 1065 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 FBXO21O94952 628 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 OAZ2O95190 189 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 ITGB1P05556 798 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 CSF2RAP15509 400 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 IGFBP6P24592 240 aaPredicted RBP13.02□□□□□ -0.33
RAB5B-204ENST00000548068 PSMA2P25787 234 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 TKTP29401 623 aaKnown RBP13.02□□□□□ -0.33
RAB5B-204ENST00000548068 CETN2P41208 172 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 SLC11A1P49279 550 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 RGS7P49802 495 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 GATMP50440 423 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 RPL7AP62424 266 aaKnown RBP13.02□□□□□ -0.33
RAB5B-204ENST00000548068 SLC6A3Q01959 620 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 PTPROQ16827 1216 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 TEX35Q5T0J7 233 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 ZNF280DQ6N043 979 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 FAM171BQ6P995 826 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.02□□□□□ -0.33
RAB5B-204ENST00000548068 RSRC2Q7L4I2 434 aaKnown RBP13.02□□□□□ -0.33
RAB5B-204ENST00000548068 ARCQ7LC44 396 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 UBE2Q1Q7Z7E8 422 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 TOP1MTQ969P6 601 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 MYLPFQ96A32 169 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms