RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PPP2R2CQ9Y2T4 447 aa16.75■□□□□ 0.27
TRAFD1-203ENST00000547063 PLXNA4Q9HCM2 1894 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 TMCO5BA8MYB1 307 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 H3BNC9 293 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 ZNF263O14978 683 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 XPO1O14980 1071 aaKnown RBP16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 AP1G2O75843 785 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 CXCL14O95715 111 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 OR1D2P34982 312 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 ACADSBP45954 432 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 ARPP19P56211 112 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 KIF5AQ12840 1032 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 PTPN14Q15678 1187 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 LIN9Q5TKA1 542 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 CHRDL2Q6WN34 429 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 ZSCAN30Q86W11 494 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 TTC30AQ86WT1 665 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 PALB2Q86YC2 1186 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 ACRBPQ8NEB7 543 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 ZNF461Q8TAF7 563 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 UBA3Q8TBC4 463 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 SLC35F5Q8WV83 523 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 POF1BQ8WVV4 589 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 CPA5Q8WXQ8 436 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 CTNNBL1Q8WYA6 563 aaPredicted RBP16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 SECISBP2LQ93073 1101 aaKnown RBP16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 HSFY1Q96LI6 401 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 TMEM209Q96SK2 561 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 TCF25Q9BQ70 676 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 LPIN3Q9BQK8 851 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 DESI2Q9BSY9 194 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 EMILIN2Q9BXX0 1053 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 LMAN2LQ9H0V9 348 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 SYNCQ9H7C4 482 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 ALG13Q9NP73 1137 aaKnown RBP16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 PNPLA8Q9NP80 782 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 DMAP1Q9NPF5 467 aaPredicted RBP16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 KCND1Q9NSA2 647 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 KRT82Q9NSB4 513 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 MTUS1Q9ULD2 1270 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 PYCARDQ9ULZ3 195 aa16.74■□□□□ 0.27
TRAFD1-203ENST00000547063 MYH10P35580 1976 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 TRIM66O15016 1216 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 KRT86O43790 486 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 LILRB3O75022 631 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 ADH1AP07327 375 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 CFHP08603 1231 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 OR4Q2P0C623 313 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 TMEM253P0C7T8 217 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 MMP8P22894 467 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 DNAJB2P25686 324 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 SSTR3P32745 418 aaPredicted RBP16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 CA8P35219 290 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 PBX2P40425 430 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 PLA2G4AP47712 749 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 ROR1Q01973 937 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 PDE4CQ08493 712 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 PDCLQ13371 301 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 GPM6BQ13491 265 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 RAB33AQ14088 237 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 ZNF662Q6ZS27 426 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 PAQR9Q6ZVX9 377 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 MCOLN2Q8IZK6 566 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 KIAA1524Q8TCG1 905 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 PPP1R13BQ96KQ4 1090 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 CALR3Q96L12 384 aaKnown RBP16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 CEP295NLQ96MC4 621 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 CLSTN3Q9BQT9 956 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 PRO3102Q9H379 93 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 CSNK1G1Q9HCP0 422 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 TMLHEQ9NVH6 421 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 ABI2Q9NYB9 513 aaPredicted RBP16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 ADAM22Q9P0K1 906 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 WDR35Q9P2L0 1181 aa16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 AFF4Q9UHB7 1163 aaKnown RBP16.73■□□□□ 0.27
TRAFD1-203ENST00000547063 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 MTMR11A4FU01 709 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 CLDN5O00501 218 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 C1RP00736 705 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 BDNFP23560 247 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 MSNP26038 577 aaKnown RBP16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 TUFMP49411 452 aaKnown RBP16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 GALCP54803 685 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 RPL10AP62906 217 aaKnown RBP16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 GPC5P78333 572 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 ARHGAP29Q52LW3 1261 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 CLEC20AQ6ZU45 233 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 MON1BQ7L1V2 547 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 WDTC1Q8N5D0 677 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 MICAL1Q8TDZ2 1067 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 KCTD13Q8WZ19 329 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 TIFAQ96CG3 184 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 C18orf8Q96DM3 657 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 SLC4A5Q9BY07 1137 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 ST7Q9NRC1 585 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 TAS2R14Q9NYV8 317 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 REXO2Q9Y3B8 237 aaKnown RBP16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 PTPRDP23468 1912 aa16.72■□□□□ 0.27
TRAFD1-203ENST00000547063 WDR27A2RRH5 827 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms