RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 MSANTD3Q96H12 275 aa16.34■□□□□ 0.21
SSH1-204ENST00000546697 TNIP3Q96KP6 325 aa16.34■□□□□ 0.21
SSH1-204ENST00000546697 LRRC3BQ96PB8 259 aa16.34■□□□□ 0.21
SSH1-204ENST00000546697 MFSD1Q9H3U5 465 aa16.34■□□□□ 0.21
SSH1-204ENST00000546697 SMYD3Q9H7B4 428 aa16.34■□□□□ 0.21
SSH1-204ENST00000546697 TMEM30AQ9NV96 361 aa16.34■□□□□ 0.21
SSH1-204ENST00000546697 EHD2Q9NZN4 543 aa16.34■□□□□ 0.21
SSH1-204ENST00000546697 NXF1Q9UBU9 619 aaKnown RBP16.34■□□□□ 0.21
SSH1-204ENST00000546697 F5P12259 2224 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 KANSL1LA0AUZ9 987 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 FAM92AA1XBS5 289 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 HEPACAM2A8MVW5 462 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 A8MXQ7 604 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 PPP1R3GB7ZBB8 358 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 STX10O60499 249 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 PDGFRBP09619 1106 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 TRIM49P0CI25 452 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 TRIM49CP0CI26 452 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 VIPR2P41587 438 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 MAGEA9P43362 315 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 PPP3CCP48454 512 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 GPR158Q5T848 1215 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 TTI2Q6NXR4 508 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 C1orf228Q6PIY5 440 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 MAMSTRQ6ZN01 415 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 PAQR9Q6ZVX9 377 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 CMTM8Q8IZV2 173 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 TRIML1Q8N9V2 468 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 PJA1Q8NG27 643 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 CLDN23Q96B33 292 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 FAM122AQ96E09 287 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 CEP63Q96MT8 703 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 GCNAQ96QF7 691 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 NELL2Q99435 816 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 DPEP3Q9H4B8 488 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 KIF9Q9HAQ2 790 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 APOBEC3GQ9HC16 384 aaKnown RBP16.33■□□□□ 0.2
SSH1-204ENST00000546697 CSNK1G1Q9HCP0 422 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 CA14Q9ULX7 337 aa16.33■□□□□ 0.2
SSH1-204ENST00000546697 PSMA7O14818 248 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 PRAMEF12O95522 483 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 OLFM2O95897 454 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 EPB41P11171 864 aaKnown RBP16.32■□□□□ 0.2
SSH1-204ENST00000546697 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
SSH1-204ENST00000546697 BDNFP23560 247 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
SSH1-204ENST00000546697 GCLMP48507 274 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 CDH8P55286 799 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 MARSP56192 900 aaKnown RBP16.32■□□□□ 0.2
SSH1-204ENST00000546697 FZD5Q13467 585 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 MDH1BQ5I0G3 518 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 DENND5BQ6ZUT9 1274 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 FILIP1Q7Z7B0 1213 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 CELF5Q8N6W0 485 aaKnown RBP16.32■□□□□ 0.2
SSH1-204ENST00000546697 ST13P5Q8NFI4 369 aaPredicted RBP16.32■□□□□ 0.2
SSH1-204ENST00000546697 FAM200AQ8TCP9 573 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
SSH1-204ENST00000546697 SLC35C1Q96A29 364 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 TSG101Q99816 390 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 DUSP9Q99956 384 aaKnown RBP16.32■□□□□ 0.2
SSH1-204ENST00000546697 B3GNT5Q9BYG0 378 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 NIF3L1Q9GZT8 377 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 ANAPC1Q9H1A4 1944 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 COMMD8Q9NX08 183 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 GCNT4Q9P109 453 aa16.32■□□□□ 0.2
SSH1-204ENST00000546697 PROB1E7EW31 1015 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 TNFRSF10BO14763 440 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 PIK3CAP42336 1068 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 RPS9P46781 194 aaKnown RBP16.31■□□□□ 0.2
SSH1-204ENST00000546697 MXI1P50539 228 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 CYP4F8P98187 520 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 PLCB2Q00722 1185 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 STIM1Q13586 685 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 TAF12Q16514 161 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 ARHGAP29Q52LW3 1261 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 SNX30Q5VWJ9 437 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 FRMD5Q7Z6J6 570 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 FUKQ8N0W3 1084 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 TTC39CQ8N584 583 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 FBXL13Q8NEE6 735 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 FLCNQ8NFG4 579 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 OVCA2Q8WZ82 227 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 MRPS31Q92665 395 aaKnown RBP16.31■□□□□ 0.2
SSH1-204ENST00000546697 FAM83CQ9BQN1 747 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 IMPG2Q9BZV3 1241 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 SLITRK6Q9H5Y7 841 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 BRD9Q9H8M2 597 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 METTL14Q9HCE5 456 aaKnown RBP16.31■□□□□ 0.2
SSH1-204ENST00000546697 LTB4R2Q9NPC1 389 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 SIT1Q9Y3P8 196 aa16.31■□□□□ 0.2
SSH1-204ENST00000546697 F8VP50 259 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 MAN2B1O00754 1011 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 ZNF263O14978 683 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 CILPO75339 1184 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 GDI1P31150 447 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 CACNA2D1P54289 1103 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 GRM2Q14416 872 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 SDHAF4Q5VUM1 108 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 FAM35AQ86V20 835 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 DTWD2Q8NBA8 298 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms