RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 SDHAF4Q5VUM1 108 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 SCN4BQ8IWT1 228 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 SUGP1Q8IWZ8 645 aaKnown RBP12.64□□□□□ -0.39
YBX3-217ENST00000546164 TTC39CQ8N584 583 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 MLKLQ8NB16 471 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 ST13P5Q8NFI4 369 aaPredicted RBP12.64□□□□□ -0.39
YBX3-217ENST00000546164 GPR152Q8TDT2 470 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 DEPDC1BQ8WUY9 529 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 SEMA4DQ92854 862 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 B3GNT5Q9BYG0 378 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 ZNF518BQ9C0D4 1074 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 SLITRK6Q9H5Y7 841 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 TASP1Q9H6P5 420 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 MMRN2Q9H8L6 949 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 OBP2AQ9NY56 170 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 RWDD2AQ9UIY3 292 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 FBXL21Q9UKT6 434 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 CTNND2Q9UQB3 1225 aa12.64□□□□□ -0.39
YBX3-217ENST00000546164 LRRN2O75325 713 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 CILPO75339 1184 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 TADA3O75528 432 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 CFHP08603 1231 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 GRIK1P39086 918 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 CLCN5P51795 746 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 NDST1P52848 882 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 STXBP5Q5T5C0 1151 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 GPR158Q5T848 1215 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 TCERG1LQ5VWI1 586 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 PAQR9Q6ZVX9 377 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 SIX5Q8N196 739 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 TTLL2Q9BWV7 592 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 PLA2G2FQ9BZM2 168 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 NUP62CLQ9H1M0 184 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 KCNH6Q9H252 994 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 EHD2Q9NZN4 543 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 HMGXB4Q9UGU5 601 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 HCN4Q9Y3Q4 1203 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 WDFY4Q6ZS81 3184 aa12.63□□□□□ -0.39
YBX3-217ENST00000546164 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 KRBA1A5PL33 1030 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 F8VP50 259 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 P4HA2O15460 535 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 GALR2O43603 387 aaPredicted RBP12.62□□□□□ -0.39
YBX3-217ENST00000546164 FGFR1OPO95684 399 aaKnown RBP12.62□□□□□ -0.39
YBX3-217ENST00000546164 NPR3P17342 541 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 PSMC3P17980 439 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 TRIM21P19474 475 aaKnown RBP12.62□□□□□ -0.39
YBX3-217ENST00000546164 ANXA13P27216 316 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 VIPR2P41587 438 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 FMO5P49326 533 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 NUBP1P53384 320 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 STX17P56962 302 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 CYP4F8P98187 520 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 FCHO2Q0JRZ9 810 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 CCDC40Q4G0X9 1142 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 WDR44Q5JSH3 913 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 VITQ6UXI7 678 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 DENND5BQ6ZUT9 1274 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 ACOT1Q86TX2 421 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 FAM35AQ86V20 835 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 MON1AQ86VX9 555 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 ARID3BQ8IVW6 561 aaPredicted RBP12.62□□□□□ -0.39
YBX3-217ENST00000546164 MFSD6LQ8IWD5 586 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 TRIM59Q8IWR1 403 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 FUKQ8N0W3 1084 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 STKLD1Q8NE28 680 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 WHAMMQ8TF30 809 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 MRPS31Q92665 395 aaKnown RBP12.62□□□□□ -0.39
YBX3-217ENST00000546164 DNASE1L2Q92874 299 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 RSPRY1Q96DX4 576 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 SMARCD1Q96GM5 515 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 TRMT61BQ9BVS5 477 aaKnown RBP12.62□□□□□ -0.39
YBX3-217ENST00000546164 NT5C1AQ9BXI3 368 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 SLC46A2Q9BY10 475 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 TRPV5Q9NQA5 729 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 ARHGEF3Q9NR81 526 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 TMEM30AQ9NV96 361 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 MAGED2Q9UNF1 606 aaPredicted RBP12.62□□□□□ -0.39
YBX3-217ENST00000546164 F5P12259 2224 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 PTPRDP23468 1912 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 NCANO14594 1321 aa12.62□□□□□ -0.39
YBX3-217ENST00000546164 HEPACAM2A8MVW5 462 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 GOLGA6L22H0YM25 854 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 CLDN5O00501 218 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 PFKLP17858 780 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 AVPR2P30518 371 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 CACNA2D1P54289 1103 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 PRKCQQ04759 706 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 CWF19L1Q69YN2 538 aaKnown RBP12.61□□□□□ -0.39
YBX3-217ENST00000546164 ASTLQ6HA08 431 aaPredicted RBP12.61□□□□□ -0.39
YBX3-217ENST00000546164 PHLDB3Q6NSJ2 640 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 CMTM8Q8IZV2 173 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 SHDQ96IW2 340 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 MED15Q96RN5 788 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 TWNKQ96RR1 684 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 HNRNPABQ99729 332 aaKnown RBP12.61□□□□□ -0.39
YBX3-217ENST00000546164 DDX23Q9BUQ8 820 aaKnown RBP12.61□□□□□ -0.39
YBX3-217ENST00000546164 SRRTQ9BXP5 876 aaKnown RBP12.61□□□□□ -0.39
YBX3-217ENST00000546164 DNAI2Q9GZS0 605 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 MFSD1Q9H3U5 465 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms