RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ZNF512Q96ME7 567 aaPredicted RBP21.74■■□□□ 1.07
HMGA2-211ENST00000545998 NAA15Q9BXJ9 866 aaKnown RBP21.74■■□□□ 1.07
HMGA2-211ENST00000545998 FHOD1Q9Y613 1164 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 ATP8B3O60423 1300 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 DOCK8Q8NF50 2099 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 NOL4O94818 638 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 SERPINC1P01008 464 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 PAEPP09466 180 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 UCHL3P15374 230 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 PTPN2P17706 415 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 GRIK1P39086 918 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 NTHL1P78549 312 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 FANCCQ00597 558 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 ARHGAP44Q17R89 818 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 PPP1R26Q5T8A7 1209 aaPredicted RBP21.74■■□□□ 1.07
HMGA2-211ENST00000545998 SDHAF4Q5VUM1 108 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 SMYD5Q6GMV2 418 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 RNF214Q8ND24 703 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 GIPC2Q8TF65 315 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 SHC3Q92529 594 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 GANQ9H2C0 597 aa21.74■■□□□ 1.07
HMGA2-211ENST00000545998 CLUHO75153 1309 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 NCOR1O75376 2440 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 ZNF638Q14966 1978 aaKnown RBP21.73■■□□□ 1.07
HMGA2-211ENST00000545998 TRIM66O15016 1216 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 RHOP08100 348 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 RFX1P22670 979 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 VEPH1Q14D04 833 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 ARHGAP17Q68EM7 881 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 DNAJB7Q7Z6W7 309 aaPredicted RBP21.73■■□□□ 1.07
HMGA2-211ENST00000545998 ITIH5Q86UX2 942 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 SMARCD1Q96GM5 515 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 SPATA17Q96L03 361 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 C8orf48Q96LL4 319 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 CORO1BQ9BR76 489 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 LRRC3Q9BY71 257 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 AVENQ9NQS1 362 aaPredicted RBP21.73■■□□□ 1.07
HMGA2-211ENST00000545998 FAM207AQ9NSI2 230 aaPredicted RBP21.73■■□□□ 1.07
HMGA2-211ENST00000545998 KIAA1257Q9ULG3 409 aa21.73■■□□□ 1.07
HMGA2-211ENST00000545998 PATJQ8NI35 1801 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 F8VP50 259 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 AP1G2O75843 785 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 KRT5P13647 590 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 ADORA2BP29275 332 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 EPHA5P54756 1037 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 NR1I3Q14994 352 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 PABPC1LQ4VXU2 614 aaKnown RBP21.72■■□□□ 1.07
HMGA2-211ENST00000545998 TMC8Q8IU68 726 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 CEP295NLQ96MC4 621 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 PHF7Q9BWX1 381 aaPredicted RBP21.72■■□□□ 1.07
HMGA2-211ENST00000545998 GPR88Q9GZN0 384 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 KRT82Q9NSB4 513 aa21.72■■□□□ 1.07
HMGA2-211ENST00000545998 EPHB6O15197 1021 aa21.71■■□□□ 1.07
HMGA2-211ENST00000545998 VDRP11473 427 aa21.71■■□□□ 1.07
HMGA2-211ENST00000545998 SGO2Q562F6 1265 aa21.71■■□□□ 1.07
HMGA2-211ENST00000545998 HS6ST3Q8IZP7 471 aa21.71■■□□□ 1.07
HMGA2-211ENST00000545998 STKLD1Q8NE28 680 aa21.71■■□□□ 1.07
HMGA2-211ENST00000545998 KCNK16Q96T55 309 aa21.71■■□□□ 1.07
HMGA2-211ENST00000545998 SMOQ99835 787 aa21.71■■□□□ 1.07
HMGA2-211ENST00000545998 CSNK1G1Q9HCP0 422 aa21.71■■□□□ 1.07
HMGA2-211ENST00000545998 DMAP1Q9NPF5 467 aaPredicted RBP21.71■■□□□ 1.07
HMGA2-211ENST00000545998 ASAH2Q9NR71 780 aa21.71■■□□□ 1.07
HMGA2-211ENST00000545998 DENND4CQ5VZ89 1909 aa21.7■■□□□ 1.07
HMGA2-211ENST00000545998 FOXN3O00409 490 aaPredicted RBP21.7■■□□□ 1.06
HMGA2-211ENST00000545998 BEST1O76090 585 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 FAM200BP0CF97 657 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 CD19P15391 556 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 HMGA1P17096 107 aaKnown RBP21.7■■□□□ 1.06
HMGA2-211ENST00000545998 ANXA13P27216 316 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 MTMR3Q13615 1198 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 RAPGEF1Q13905 1077 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 SLC5A9Q2M3M2 681 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 TJAP1Q5JTD0 557 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 LEMD2Q8NC56 503 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 ZMIZ2Q8NF64 920 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 NEK11Q8NG66 645 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 TFAP2BQ92481 460 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 PCMTD1Q96MG8 357 aaPredicted RBP21.7■■□□□ 1.06
HMGA2-211ENST00000545998 STK33Q9BYT3 514 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 ZNF334Q9HCZ1 680 aaPredicted RBP21.7■■□□□ 1.06
HMGA2-211ENST00000545998 DAAM1Q9Y4D1 1078 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 BDP1A6H8Y1 2624 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 SLC38A8A6NNN8 435 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 O00370 1275 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 CALCAP01258 141 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 CSH1P0DML2 217 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 CSH2P0DML3 217 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 FSHRP23945 695 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 CCR2P41597 374 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 UBASH3AP57075 661 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 DRAP1Q14919 205 aaPredicted RBP21.7■■□□□ 1.06
HMGA2-211ENST00000545998 PRSS36Q5K4E3 855 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 CLEC20AQ6ZU45 233 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 FAM71AQ8IYT1 594 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 ZSWIM1Q9BR11 485 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 PRKAG3Q9UGI9 489 aa21.7■■□□□ 1.06
HMGA2-211ENST00000545998 TTC28Q96AY4 2481 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 OBSL1O75147 1896 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 A0A1W2PQC6 194 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 NRG2O14511 850 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms