RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.81□□□□□ -1.32
SNHG1-225ENST00000545920 TCRBV7S2A1N4TA0A589 114 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 A8MXQ7 604 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 KLF11O14901 512 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 LIASO43766 372 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 CCDC22O60826 627 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ZNF189O75820 626 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 SMNDC1O75940 238 aaKnown RBP eCLIP6.8□□□□□ -1.321e-13■■■■■ 31.5
SNHG1-225ENST00000545920 RPLP1P05386 114 aaKnown RBP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ADRB2P07550 413 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ASNSP08243 561 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 KRT7P08729 469 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 KRT16P08779 473 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 TIMP2P16035 220 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ITGB5P18084 799 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 KRT15P19012 456 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ATP6V1C1P21283 382 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 POLD1P28340 1107 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ADSSP30520 456 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 GPC1P35052 558 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 COPB2P35606 906 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 CHKAP35790 457 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 NPTX2P47972 431 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 KCNJ1P48048 391 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 CLCN2P51788 898 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 RBM5P52756 815 aaKnown RBP eCLIP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 VCPP55072 806 aaKnown RBP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ARL4CP56559 192 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 KCNQ4P56696 695 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 GEMIN4P57678 1058 aaKnown RBP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 KCNJ2P63252 427 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 DLG4P78352 724 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 SATB1Q01826 763 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 OCRLQ01968 901 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 MTMR1Q13613 665 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ACAP1Q15027 740 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 SEPT7Q16181 437 aaKnown RBP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ZACNQ401N2 412 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ANKRD20A2Q5SQ80 823 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ANKRD20A1Q5TYW2 823 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ANKRD20A3Q5VUR7 823 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 C9orf131Q5VYM1 1079 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 CAPRIN2Q6IMN6 1127 aaKnown RBP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 UBR3Q6ZT12 1888 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 GSTA5Q7RTV2 222 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 NLRX1Q86UT6 975 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 AMIGO3Q86WK7 504 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 DNAAF5Q86Y56 855 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ECHDC2Q86YB7 292 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ZFPM1Q8IX07 1006 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 SRRM1Q8IYB3 904 aaKnown RBP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ANKRD42Q8N9B4 389 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 SLC43A3Q8NBI5 491 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 SMC1BQ8NDV3 1235 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 PLEKHO2Q8TD55 490 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 TAS1R2Q8TE23 839 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 RHBDD1Q8TEB9 315 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 FNIP1Q8TF40 1166 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 C1orf54Q8WWF1 131 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 SEMA4DQ92854 862 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 RNF34Q969K3 372 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 NAF1Q96HR8 494 aaKnown RBP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 FNBP1Q96RU3 617 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 SIKE1Q9BRV8 207 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 IMPG2Q9BZV3 1241 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 GRIP2Q9C0E4 1043 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 TGIF2Q9GZN2 237 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 VCXQ9H320 206 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 PCIF1Q9H4Z3 704 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 CHST7Q9NS84 486 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ARHGAP28Q9P2N2 729 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ANKFY1Q9P2R3 1169 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 WRAP73Q9P2S5 460 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 CCPG1Q9ULG6 757 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 STRIP2Q9ULQ0 834 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 PHTF1Q9UMS5 762 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 BCS1LQ9Y276 419 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 MTO1Q9Y2Z2 717 aaKnown RBP6.8□□□□□ -1.32
SNHG1-225ENST00000545920 SIPA1L1O43166 1804 aa6.8□□□□□ -1.32
SNHG1-225ENST00000545920 ASTN2O75129 1339 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-225ENST00000545920 CLUHO75153 1309 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 UMODL1Q5DID0 1318 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 IQANK1A0A1B0GTG1 560 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 DENND3A2RUS2 1198 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 A6NHS1 94 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 E7ESA3 106 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 SLC16A4O15374 487 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 TYROBPO43914 113 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 DIAPH2O60879 1101 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 CSDE1O75534 798 aaKnown RBP6.79□□□□□ -1.32
SNHG1-225ENST00000545920 TOMM70O94826 608 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 GDF11O95390 407 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 NPTXRO95502 500 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 RALAP11233 206 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 KRT5P13647 590 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 PCSK2P16519 638 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 GNAZP19086 355 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 RRM1P23921 792 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 MARK3P27448 753 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 POLR2BP30876 1174 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms