RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 NPEPPSP55786 919 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 ARL4CP56559 192 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 RAP2BP61225 183 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 POU6F2P78424 691 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-222ENST00000545308 FOXL1Q12952 345 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 CSRP2Q16527 193 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 ARHGAP15Q53QZ3 475 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 UTP14CQ5TAP6 766 aaKnown RBP4.8□□□□□ -1.64
SNHG1-222ENST00000545308 FBXO38Q6PIJ6 1188 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 USP49Q70CQ1 688 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 USP37Q86T82 979 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 TICAM2Q86XR7 235 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 SDR16C5Q8N3Y7 309 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 NME8Q8N427 588 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 STT3BQ8TCJ2 826 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 RABGGTAQ92696 567 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 LTV1Q96GA3 475 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-222ENST00000545308 VKORC1Q9BQB6 163 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 PAGR1Q9BTK6 254 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 EIF2AQ9BY44 585 aaKnown RBP4.8□□□□□ -1.64
SNHG1-222ENST00000545308 TINAGL1Q9GZM7 467 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-222ENST00000545308 RGL1Q9NZL6 768 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 MID2Q9UJV3 735 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 GJD2Q9UKL4 321 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 FANCAO15360 1455 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 NEO1Q92859 1461 aa4.8□□□□□ -1.64
SNHG1-222ENST00000545308 RIMS1Q86UR5 1692 aaKnown RBP4.8□□□□□ -1.64
SNHG1-222ENST00000545308 A0A1B0GVC2 190 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 UBE2QL1A1L167 161 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 M0QYG6 137 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 EYA2O00167 538 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 EIF3FO00303 357 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-222ENST00000545308 HOXA3O43365 443 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-222ENST00000545308 AGFG2O95081 481 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 GNAI2P04899 355 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 PIM1P11309 404 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-222ENST00000545308 FDXRP22570 491 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 SLC6A2P23975 617 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 IL1R2P27930 398 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 MSX2P35548 267 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-222ENST00000545308 CLRN1P58418 232 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 FOXD4Q12950 439 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-222ENST00000545308 BMT2Q1RMZ1 405 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 FNDC7Q5VTL7 733 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 MZT2AQ6P582 158 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 KIAA0408Q6ZU52 694 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 RFX8Q6ZV50 586 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 XYLT1Q86Y38 959 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 GALNT15Q8N3T1 639 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 NLGN4YQ8NFZ3 816 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-222ENST00000545308 FAM71BQ8TC56 605 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 ZNF384Q8TF68 577 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 NEU4Q8WWR8 484 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-222ENST00000545308 SCAMP4Q969E2 229 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 SPSB4Q96A44 273 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 KLHL32Q96NJ5 620 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 SPATA5L1Q9BVQ7 753 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNHG1-222ENST00000545308 MS4A7Q9GZW8 240 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-222ENST00000545308 NECTIN3Q9NQS3 549 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 PLA2G3Q9NZ20 509 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 FAM30AQ9NZY2 134 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 PDP2Q9P2J9 529 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 XPR1Q9UBH6 696 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 FBXO9Q9UK97 447 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-222ENST00000545308 TMX2Q9Y320 296 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 PAXBP1Q9Y5B6 917 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 PTPRTO14522 1441 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 MADDQ8WXG6 1647 aa4.79□□□□□ -1.64
SNHG1-222ENST00000545308 UGGT2Q9NYU1 1516 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 PREX1Q8TCU6 1659 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 A0A087X1B8 175 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 CDHR4A6H8M9 788 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 RRN3P2A6NIE6 340 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 TBKBP1A7MCY6 615 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 B5MCH6 92 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 KCNQ3O43525 872 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 RASSF9O75901 435 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 KIF20AO95235 890 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 POMCP01189 267 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 ANXA1P04083 346 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 CENPBP07199 599 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-222ENST00000545308 ITGA5P08648 1049 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 FAM163BP0C2L3 166 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 HIBADHP31937 336 aaKnown RBP4.78□□□□□ -1.64
SNHG1-222ENST00000545308 COPAP53621 1224 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 TCF15Q12870 199 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 RIN1Q13671 783 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 TUBA3CQ13748 450 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 UBXN2BQ14CS0 331 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 TIGD6Q17RP2 521 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 WDR78Q5VTH9 848 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 TANGO2Q6ICL3 276 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 TUBA3EQ6PEY2 450 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 KRT28Q7Z3Y7 464 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 PPP1R32Q7Z5V6 425 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 PCGF5Q86SE9 256 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 ZNF575Q86XF7 245 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 FAM46DQ8NEK8 389 aa4.78□□□□□ -1.64
SNHG1-222ENST00000545308 RAPGEF4Q8WZA2 1011 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms