RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 SPIRE2Q8WWL2 714 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 STAU1O95793 577 aaKnown RBP20.78■□□□□ 0.92
BPTF-208ENST00000544778 ITGB3P05106 788 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 CKBP12277 381 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 MTSS1LQ765P7 747 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 SEPT1Q8WYJ6 367 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 NUDT12Q9BQG2 462 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 NPC1L1Q9UHC9 1359 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 KIAA0391O15091 583 aaKnown RBP20.78■□□□□ 0.92
BPTF-208ENST00000544778 C4BPBP20851 252 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 AGAP9Q5VTM2 703 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 ZNF333Q96JL9 665 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 RPRD1AQ96P16 312 aaPredicted RBP20.78■□□□□ 0.92
BPTF-208ENST00000544778 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.78■□□□□ 0.92
BPTF-208ENST00000544778 DNMT1P26358 1616 aaKnown RBP20.78■□□□□ 0.92
BPTF-208ENST00000544778 FAM25AB3EWG3 89 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 FAM25CB3EWG5 89 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 FAM25GB3EWG6 89 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 ATP6V1B1P15313 513 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 DENND5BQ6ZUT9 1274 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 C19orf18Q8NEA5 215 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 TEX13BQ9BXU2 312 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 ANKARQ7Z5J8 1434 aa20.78■□□□□ 0.92
BPTF-208ENST00000544778 EPHB2P29323 1055 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 CPA2P48052 419 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 NAPEPLDQ6IQ20 393 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 GUF1Q8N442 669 aaKnown RBP20.77■□□□□ 0.92
BPTF-208ENST00000544778 SERAC1Q96JX3 654 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 PHACTR1Q9C0D0 580 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 PDZK1P1A8MUH7 402 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 M0QYT0 321 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 NT5C2P49902 561 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 ZNF284Q2VY69 593 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 GINS4Q9BRT9 223 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 MANSC1Q9H8J5 431 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 SNRPAP09012 282 aaKnown RBP20.77■□□□□ 0.92
BPTF-208ENST00000544778 FCGRTP55899 365 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 ANGEL2Q5VTE6 544 aaKnown RBP20.77■□□□□ 0.92
BPTF-208ENST00000544778 SYTL1Q8IYJ3 562 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 REEP2Q9BRK0 252 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 POLR1DQ9Y2S0 133 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 TRPC5OSA6NMA1 111 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 B2RBV5 119 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 SLC16A3O15427 465 aaKnown RBP20.77■□□□□ 0.92
BPTF-208ENST00000544778 ZNF682O95780 498 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 ITIH2P19823 946 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 TGM2P21980 687 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 FMO5P49326 533 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 HEATR4Q86WZ0 1026 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 SPATA4Q8NEY3 305 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 NACC2Q96BF6 587 aa20.77■□□□□ 0.92
BPTF-208ENST00000544778 MTO1Q9Y2Z2 717 aaKnown RBP20.77■□□□□ 0.92
BPTF-208ENST00000544778 GLRA4Q5JXX5 417 aa20.77■□□□□ 0.91
BPTF-208ENST00000544778 UNC45BQ8IWX7 931 aa20.77■□□□□ 0.91
BPTF-208ENST00000544778 FBXO32Q969P5 355 aa20.77■□□□□ 0.91
BPTF-208ENST00000544778 ERAP1Q9NZ08 941 aa20.77■□□□□ 0.91
BPTF-208ENST00000544778 PIPSLA2A3N6 862 aa20.77■□□□□ 0.91
BPTF-208ENST00000544778 AGTP01019 485 aa20.77■□□□□ 0.91
BPTF-208ENST00000544778 ABCB1P08183 1280 aaPredicted RBP20.77■□□□□ 0.91
BPTF-208ENST00000544778 STAG3L1P0CL83 205 aa20.77■□□□□ 0.91
BPTF-208ENST00000544778 TYW3Q6IPR3 259 aaKnown RBP20.77■□□□□ 0.91
BPTF-208ENST00000544778 SLC25A24Q6NUK1 477 aa20.77■□□□□ 0.91
BPTF-208ENST00000544778 WDR36Q8NI36 951 aaKnown RBP20.77■□□□□ 0.91
BPTF-208ENST00000544778 VPS9D1Q9Y2B5 631 aa20.77■□□□□ 0.91
BPTF-208ENST00000544778 GPRC5AQ8NFJ5 357 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 DDI1Q8WTU0 396 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 FOXP2O15409 715 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 SUPT7LO94864 414 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 TFE3P19532 575 aaPredicted RBP20.76■□□□□ 0.91
BPTF-208ENST00000544778 ZNF544Q6NX49 715 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 TDRKHQ9Y2W6 561 aaKnown RBP20.76■□□□□ 0.91
BPTF-208ENST00000544778 ZC3H11AO75152 810 aaKnown RBP eCLIP20.76■□□□□ 0.91
BPTF-208ENST00000544778 KPNA1P52294 538 aaPredicted RBP20.76■□□□□ 0.91
BPTF-208ENST00000544778 HIRAP54198 1017 aaPredicted RBP20.76■□□□□ 0.91
BPTF-208ENST00000544778 DPP3Q9NY33 737 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 PDIA6Q15084 440 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 BPIFA3Q9BQP9 254 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 CIPCQ9C0C6 399 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 FBXL21Q9UKT6 434 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 USP15Q9Y4E8 981 aaPredicted RBP20.76■□□□□ 0.91
BPTF-208ENST00000544778 PZPP20742 1482 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 MIEF1Q9NQG6 463 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 AVENQ9NQS1 362 aaPredicted RBP20.76■□□□□ 0.91
BPTF-208ENST00000544778 FBXO10Q9UK96 956 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 PDXKO00764 312 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 SH3GL1Q99961 368 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 SPATA2Q9UM82 520 aa20.76■□□□□ 0.91
BPTF-208ENST00000544778 ANXA9O76027 345 aa20.75■□□□□ 0.91
BPTF-208ENST00000544778 FBXW10Q5XX13 1052 aa20.75■□□□□ 0.91
BPTF-208ENST00000544778 XPO6Q96QU8 1125 aaKnown RBP20.75■□□□□ 0.91
BPTF-208ENST00000544778 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
BPTF-208ENST00000544778 CKMP06732 381 aa20.75■□□□□ 0.91
BPTF-208ENST00000544778 ZNF23P17027 643 aa20.75■□□□□ 0.91
BPTF-208ENST00000544778 MIB1Q86YT6 1006 aa20.75■□□□□ 0.91
BPTF-208ENST00000544778 HASPINQ8TF76 798 aa20.75■□□□□ 0.91
BPTF-208ENST00000544778 PLEKHF1Q96S99 279 aa20.75■□□□□ 0.91
BPTF-208ENST00000544778 RSAD1Q9HA92 442 aa20.75■□□□□ 0.91
BPTF-208ENST00000544778 CDC42BPGQ6DT37 1551 aa20.75■□□□□ 0.91
BPTF-208ENST00000544778 MOV10L1Q9BXT6 1211 aaKnown RBP20.75■□□□□ 0.91
BPTF-208ENST00000544778 EXO5Q9H790 373 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms