RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CSNK1G1Q9HCP0 422 aa20.33■□□□□ 0.85
DDX55-211ENST00000544429 MRPS23Q9Y3D9 190 aaKnown RBP20.33■□□□□ 0.85
DDX55-211ENST00000544429 SYCE3A1L190 88 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 LRRC10BA6NIK2 292 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 ANHXE9PGG2 379 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 TNFRSF10AO00220 468 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 CSH1P0DML2 217 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 CSH2P0DML3 217 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 CEBPBP17676 345 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 PON1P27169 355 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 SSTR3P32745 418 aaPredicted RBP20.32■□□□□ 0.84
DDX55-211ENST00000544429 CYP4A22Q5TCH4 519 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 SDHAF4Q5VUM1 108 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 GBP6Q6ZN66 633 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 APTXQ7Z2E3 356 aaKnown RBP20.32■□□□□ 0.84
DDX55-211ENST00000544429 TMEM150AQ86TG1 271 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 CREBRFQ8IUR6 639 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 DHX40Q8IX18 779 aaKnown RBP20.32■□□□□ 0.84
DDX55-211ENST00000544429 SHKBP1Q8TBC3 707 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 GIPC2Q8TF65 315 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 KAT5Q92993 513 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 JAKMIP2Q96AA8 810 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 TMEM176AQ96HP8 235 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 NAT10Q9H0A0 1025 aaKnown RBP20.32■□□□□ 0.84
DDX55-211ENST00000544429 GDE1Q9NZC3 331 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 CNTN6Q9UQ52 1028 aa20.32■□□□□ 0.84
DDX55-211ENST00000544429 NUP210Q8TEM1 1887 aaPredicted RBP20.31■□□□□ 0.84
DDX55-211ENST00000544429 F8VP50 259 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 TRIM66O15016 1216 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 FGF19O95750 216 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 CCDC130P13994 396 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 SLC9A1P19634 815 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 GBP2P32456 591 aaPredicted RBP20.31■□□□□ 0.84
DDX55-211ENST00000544429 YWHAEP62258 255 aaKnown RBP20.31■□□□□ 0.84
DDX55-211ENST00000544429 MTMR3Q13615 1198 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 KRT31Q15323 416 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 NFKBIBQ15653 356 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 EXOC3L4Q17RC7 722 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 ZSCAN23Q3MJ62 389 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 SMYD5Q6GMV2 418 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 PPM1KQ8N3J5 372 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 ZMIZ2Q8NF64 920 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 SLC2A14Q8TDB8 520 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 SMARCD1Q96GM5 515 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 CRACR2AQ9BSW2 395 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 TTLL2Q9BWV7 592 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 SIX2Q9NPC8 291 aa20.31■□□□□ 0.84
DDX55-211ENST00000544429 SLC38A8A6NNN8 435 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 F11P03951 625 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 MYL4P12829 197 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 GRIK1P39086 918 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 ZNF132P52740 706 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 KCNMA1Q12791 1236 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 HTR4Q13639 388 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 ZNF394Q53GI3 561 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 ARHGAP17Q68EM7 881 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 SCN4BQ8IWT1 228 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 AOPEPQ8N6M6 819 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 STKLD1Q8NE28 680 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 ING5Q8WYH8 240 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 CYFIP2Q96F07 1278 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 FAM49BQ9NUQ9 324 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 IL37Q9NZH6 218 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 APEX2Q9UBZ4 518 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 LIMD1Q9UGP4 676 aa20.3■□□□□ 0.84
DDX55-211ENST00000544429 LIMA1Q9UHB6 759 aaKnown RBP20.3■□□□□ 0.84
DDX55-211ENST00000544429 ATP8B3O60423 1300 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 A0A1W2PRU2 124 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 TNFRSF10BO14763 440 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 TADA3O75528 432 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 BEST1O76090 585 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 GABRR2P28476 465 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 ZNF165P49910 485 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 IQCB1Q15051 598 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 PPP1R26Q5T8A7 1209 aaPredicted RBP20.29■□□□□ 0.84
DDX55-211ENST00000544429 RRAGAQ7L523 313 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 ENOSF1Q7L5Y1 443 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 FAM200AQ8TCP9 573 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 NXPE3Q969Y0 559 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 ZSWIM3Q96MP5 696 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 KCNK16Q96T55 309 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 SMOQ99835 787 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 DMAP1Q9NPF5 467 aaPredicted RBP20.29■□□□□ 0.84
DDX55-211ENST00000544429 KRT82Q9NSB4 513 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 IGSF9Q9P2J2 1179 aa20.29■□□□□ 0.84
DDX55-211ENST00000544429 RNF225M0QZC1 329 aaPredicted RBP20.28■□□□□ 0.84
DDX55-211ENST00000544429 DLL1O00548 723 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 PAEPP09466 180 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 GJA1P17302 382 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 TRIM21P19474 475 aaKnown RBP20.28■□□□□ 0.84
DDX55-211ENST00000544429 CDC25CP30307 473 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 USP46P62068 366 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 APBA1Q02410 837 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 TEAD2Q15562 447 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 PTPN21Q16825 1174 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 CLEC20AQ6ZU45 233 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 DENND5BQ6ZUT9 1274 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 FAM81BQ96LP2 452 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 DNAI2Q9GZS0 605 aa20.28■□□□□ 0.84
DDX55-211ENST00000544429 KCNK12Q9HB15 430 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms