RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ABCF3Q9NUQ8 709 aa15.78■□□□□ 0.12
CHFR-223ENST00000544268 SETD4Q9NVD3 440 aa15.78■□□□□ 0.12
CHFR-223ENST00000544268 ADAM22Q9P0K1 906 aa15.78■□□□□ 0.12
CHFR-223ENST00000544268 AKT3Q9Y243 479 aa15.78■□□□□ 0.12
CHFR-223ENST00000544268 LRRC42Q9Y546 428 aa15.78■□□□□ 0.12
CHFR-223ENST00000544268 CEP350Q5VT06 3117 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 A0A0B4J269 797 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 INO80B-WBP1J3KQ70 363 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 MMP13P45452 471 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 APLP1P51693 650 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 ITGA8P53708 1063 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 PSMD6Q15008 389 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 PPP2R5EQ16537 467 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 KYNUQ16719 465 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 HP1BP3Q5SSJ5 553 aaPredicted RBP15.77■□□□□ 0.12
CHFR-223ENST00000544268 KAZNQ674X7 775 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 TXNRD3NBQ6F5E7 133 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 SLFN12LQ6IEE8 588 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 HOOK3Q86VS8 718 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 KLHL29Q96CT2 875 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 MSTO1Q9BUK6 570 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 MRPL4Q9BYD3 311 aaKnown RBP15.77■□□□□ 0.12
CHFR-223ENST00000544268 INO80BQ9C086 356 aaPredicted RBP15.77■□□□□ 0.12
CHFR-223ENST00000544268 IFT122Q9HBG6 1241 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 CHCHD3Q9NX63 227 aaKnown RBP15.77■□□□□ 0.12
CHFR-223ENST00000544268 PCDHB2Q9Y5E7 798 aa15.77■□□□□ 0.12
CHFR-223ENST00000544268 CSDE1O75534 798 aaKnown RBP15.77■□□□□ 0.11
CHFR-223ENST00000544268 WFS1O76024 890 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 CYP1A1P04798 512 aaPredicted RBP15.77■□□□□ 0.11
CHFR-223ENST00000544268 IQCF3P0C7M6 154 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 AKR1A1P14550 325 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 HSPA6P17066 643 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 GNA15P30679 374 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 GTF2H1P32780 548 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 MSH2P43246 934 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 MRPS35P82673 323 aaKnown RBP15.77■□□□□ 0.11
CHFR-223ENST00000544268 MAMLD1Q13495 774 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 CUL2Q13617 745 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 LBRQ14739 615 aaKnown RBP15.77■□□□□ 0.11
CHFR-223ENST00000544268 WDR44Q5JSH3 913 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 ZPBP2Q6X784 338 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 AP5M1Q9H0R1 490 aa15.77■□□□□ 0.11
CHFR-223ENST00000544268 MTRF1LQ9UGC7 380 aaKnown RBP15.77■□□□□ 0.11
CHFR-223ENST00000544268 B4GALT5O43286 388 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 THAP12O43422 761 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 VIMP08670 466 aaKnown RBP15.76■□□□□ 0.11
CHFR-223ENST00000544268 KRT16P08779 473 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 ZSCAN5DPP0CG00 497 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 CPT1AP50416 773 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 COPS2P61201 443 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 NOMO3P69849 1222 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 MXRA7P84157 204 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 SP3Q02447 781 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 MBTD1Q05BQ5 628 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 BNIP1Q12981 228 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 TRIM32Q13049 653 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 C12orf50Q8NA57 414 aaPredicted RBP15.76■□□□□ 0.11
CHFR-223ENST00000544268 TEKT4Q8WW24 435 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 ACO2Q99798 780 aaKnown RBP15.76■□□□□ 0.11
CHFR-223ENST00000544268 DCLK3Q9C098 648 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 GGT7Q9UJ14 662 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 ASB3Q9Y575 518 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 CNTNAP2Q9UHC6 1331 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 A0A087WZ62 844 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 RASGRF2O14827 1237 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 TOM1L1O75674 476 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 TRPA1O75762 1119 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 MYL3P08590 195 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 SMIM10L2AP0DMW4 78 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 SMIM10L2BP0DMW5 78 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 CYBAP13498 195 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 RARGP13631 454 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 ETS1P14921 441 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 NOP14P78316 857 aaKnown RBP15.76■□□□□ 0.11
CHFR-223ENST00000544268 CLDN10P78369 228 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 CENPCQ03188 943 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 CMPK2Q5EBM0 449 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 ANO7Q6IWH7 933 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 LMNTD2Q8IXW0 634 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 CYP4X1Q8N118 509 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 RBBP8NLQ8NC74 664 aaPredicted RBP15.76■□□□□ 0.11
CHFR-223ENST00000544268 HAUS1Q96CS2 278 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 FDXACB1Q9BRP7 624 aaPredicted RBP15.76■□□□□ 0.11
CHFR-223ENST00000544268 FZD8Q9H461 694 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 KIAA1586Q9HCI6 787 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 TBK1Q9UHD2 729 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 Q9Y3F1 56 aa15.76■□□□□ 0.11
CHFR-223ENST00000544268 MYADML2A6NDP7 307 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 OSTNP61366 133 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 CALCOCO2Q13137 446 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 MFSD10Q14728 455 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 FSCN1Q16658 493 aaKnown RBP15.75■□□□□ 0.11
CHFR-223ENST00000544268 SGSM1Q2NKQ1 1148 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 ZNF568Q3ZCX4 644 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 MFSD14CQ5VZR4 134 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 RHBDF2Q6PJF5 856 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 SCARA5Q6ZMJ2 495 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 EXOC3L1Q86VI1 746 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 KIAA0319LQ8IZA0 1049 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 PGM2Q96G03 612 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms